| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Achl_1139 |
|---|
| Symbol | |
|---|
| ID | 7292584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter chlorophenolicus A6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011886 |
|---|
| Strand | - |
|---|
| Start bp | 1249899 |
|---|
| End bp | 1251305 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643589544 |
|---|
| Product | transcriptional regulator, GntR family with aminotransferase domain |
|---|
| Protein accession | YP_002487219 |
|---|
| Protein GI | 220911910 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.00414421 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG ATAGCAGTTC GCGGATTGTC CTGGCACTCA AAAAGTGGAT TGCCGGTGCC
GCGCCGGGAG CGAAACTGCC GTCCACGCGC TCCCTGGTGG CCGAGTACCA GGCCAGCCCG
GTCACGGTGC AGAAGGCGCT GCAGGCGTTG ACGGCGCAGG GACTGATCGA AAGCCGTCCC
GGAGTGGGAA CCTTCGTGCG GGCCGTCCGG ACGGCGCGCC CCGCGGACTA CGGCTGGCAA
ACCGCGGCGC TGGGGTCGCC GTCGGCCGCG CTGCCGTCGT CGTCCACCAT GCGCACGGTG
CCCAATGACG CCATCTGGTT CCACTCGGGC TACCCGGACC GTGAACTGCT GCCGGAACGC
CTGGTGCGTG CGGCTCTGGC CCGGGCAGCG CGCGGTGACG CGGCACTGTC GCGCCCGCCG
GCGGCCGGGA TGCCGGAGCT GCAGCACTGG TTTGCCCAGG AGCTGGGGTC GGCGACGCCG
GTGGGCATCA CTCCTCCGAC GCCGAGTGAC GTGATCGTGC TGCCGGGAAG CCAGAGCGGA
CTGAGCTCCA TCTTCCGGGC GCTGGTGGGG GCCGGGCAGC CGCTGCTGAT GGAGTCGCCC
ACCTACTGGG GCGCCATTTT GGCCGCCGCA CAGACGGGCG TCCGGGTGGT GCCGGTGCCC
AGCGGGCCGG ACGGCCCGGA CCCGGTGGAG CTGGCCCGGG CGTTCGAGGA GACCGGCGCG
CGGGCGTTCT ACGCCCAGCC CAACTACGCC AACCCCAGCG GCGCCCAGTG GGCACCCGGG
CGCGGCGGCG AGGTCCTGGA GGTGGCGCGC GCGCACGGGG CGTTCGTCAT CGAGGACGAC
TGGGCCCATG ATTTCGGCAT CACCTCAACG CCGGTGCCGC TGGCCACGCA GGACGATTCC
GGGCACGTCA TCTACATCAG GTCGCTGACC AAGAGCGTAT CCACGTCTGT GCGGATTGCC
GCCGTTGTTG CCCGGGGTCC GGCCCGGGAG CGGATCCTGG CGCACCGGGC GGCGGAATCG
ATGTACGTCA GCGGGCTGCT GCAGGCCGCG GCCCTGGATG TGGTGACGCA GCCTGGGTGG
CAAACCCACC TGCGGAGCCT CCGCCAGCAG CTGCAGTCCC GCAGGGACCT GCTGGTGACG
AGCATCCGGG AACACGTGCC GGATGCGCAT ATCGAGCTGC TGCCCAAAGG CGGCCTGAAC
CTCTGGCTGC GGATGCCCGA CGGCACGGAC CTGCCCCGGC TCACCCGGGA CTGCGAGGAC
AACGGGGTGA TCATCGCGGC CGGCACCGAA TGGTTCCCGG CCGAACCTGC CGGCCCGTTC
GTCCGGCTCA ACTACTCCGG CCCCAACCCG GCGGCCTACC CGCAGGGTGC CCGCCTGATC
GGCGAGGCAC TGGCGCGGCA ATTCTGA
|
|---|
| Protein sequence | MNNDSSSRIV LALKKWIAGA APGAKLPSTR SLVAEYQASP VTVQKALQAL TAQGLIESRP
GVGTFVRAVR TARPADYGWQ TAALGSPSAA LPSSSTMRTV PNDAIWFHSG YPDRELLPER
LVRAALARAA RGDAALSRPP AAGMPELQHW FAQELGSATP VGITPPTPSD VIVLPGSQSG
LSSIFRALVG AGQPLLMESP TYWGAILAAA QTGVRVVPVP SGPDGPDPVE LARAFEETGA
RAFYAQPNYA NPSGAQWAPG RGGEVLEVAR AHGAFVIEDD WAHDFGITST PVPLATQDDS
GHVIYIRSLT KSVSTSVRIA AVVARGPARE RILAHRAAES MYVSGLLQAA ALDVVTQPGW
QTHLRSLRQQ LQSRRDLLVT SIREHVPDAH IELLPKGGLN LWLRMPDGTD LPRLTRDCED
NGVIIAAGTE WFPAEPAGPF VRLNYSGPNP AAYPQGARLI GEALARQF
|
|---|
| |