Gene Acel_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2047 
Symbol 
ID4486211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2318568 
End bp2319431 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID639730843 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_873805 
Protein GI117929254 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGG TCGCGTATCG TCAACCGCGT CAAGCGTGGG AGCCCCGAAT ACCGTGGGGG 
ACGATTTCCG CGTATGCCGC GGCCGTCGTC GTGTTCGTCG TCACCCTGAT CCCGCTCTTC
TTCGTCTTCA TCGGTGGATT CCGTACGACG GCCGCGATCA ACGCATCGCC GGCGGGTTGG
CCGCACCCGT GGGTCTTGTC GAATTACCGC GACATTGTCA CGTCGTCCAC ATTCTGGCGC
TTCATGGGAA ACAGCGCCAT CATCGCTGTT GTCGCGACGG TCCTCACGGT CGTGATCGGT
GCGATGGCGT CATTTGCGCT GTCGCGGTAC GCATTCCGCG GGCGGGAGGC TATCTACGCG
TTCTTCACCA TCGGGTTGCT CTTCCCGCTG ACGGTCGCCG CACTCCCGCT CTACCTCTGG
TTGCGGGATC TCGGGCTCCT GGAGAATTAC TTCGGAGTCG CCATCCCGGA GGCAGCGTTC
TCGCTGTCGA TCACCATTGT CATCCTCCGG CCGTTCATGC GGGCCATTCC GGCTGAGCTG
GAGGATGCCG CCGTCGTCGA CGGATCCAGC CGCCTCGGAT TCTTTGTGCG CATTCTCCTT
CCGCTCTCCC GGCCGGCACT GGCGACGGTG GCGATTCTCT CGTTCGTCAC GAGCTGGAAC
TTCTACCTGC TCCCCCTGCT CGTCTTCAAT GACCAGCAAC ATTTCACCCT TCCCTTGGGC
GTTGCGGCTT TCCAGACGCA GTACTCCCAG GACACGGCGC GTGTGCTGGC TTTCACTGCG
CTGTCGATCC TGCCGACGTT GCTGTTCTTC GTGGCAGCGG AGCGGCGCAT CGTTGGTGCG
CTCACCGGCG CGGTCAAGGG CTGA
 
Protein sequence
MSAVAYRQPR QAWEPRIPWG TISAYAAAVV VFVVTLIPLF FVFIGGFRTT AAINASPAGW 
PHPWVLSNYR DIVTSSTFWR FMGNSAIIAV VATVLTVVIG AMASFALSRY AFRGREAIYA
FFTIGLLFPL TVAALPLYLW LRDLGLLENY FGVAIPEAAF SLSITIVILR PFMRAIPAEL
EDAAVVDGSS RLGFFVRILL PLSRPALATV AILSFVTSWN FYLLPLLVFN DQQHFTLPLG
VAAFQTQYSQ DTARVLAFTA LSILPTLLFF VAAERRIVGA LTGAVKG