Gene Acel_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1945 
Symbol 
ID4486364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2203069 
End bp2203680 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID639730736 
Product50S ribosomal protein L25/general stress protein Ctc 
Protein accessionYP_873703 
Protein GI117929152 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAGG TACGCATCAA GGCCGAGCCG CGGACCGAGT TCGGCAAGGG TGCCGCGCGT 
CGGGTGCGCC GTGCCGGCAA AGTTCCCGCC GTGCTGTACG GTCACGGCAC CCCGCCCCGG
CACATCAGCC TCCCCGGGCA TGAGTTGATG CTTGCGCTGA AGACGCCCAA CGTTCTGCTC
CGGCTCGAGG GGCTGGAGGG TCCGGACGAC GGTGAGCTCG CGCTGCCCAA GGCCGTGCAG
CGCAACGTCG TGACCGGATT TCTCGAGCAC GTCGATTTGC TGCTGGTACG CCGCGGGGAG
CAGGTCGAGG TCGATGTGCC GCTGCGATTC GTGGGGACGC ATGCTCCCGG CGGGGTTCTC
GAGGAGCATC TGGTGGCTCT CCCGGTGCGC GCCGACGCCA CCCGCATCCC GGAGGAAATC
GAAGTTTCCC TTGACGGGCT GGAGATCGGC GGTTCGATCT ACGTGCGTGA CGTGCGTCTG
CCGGACGGGG TGACCGCCGC GGCGGAGCCG GATGAGGTCG TCGTCCACCT GTTGCCGGCG
CTGACGGCGT CCGAACTGGC CGAGGCGGTT GAGGGCGCGA CCGAAACCGG TGCCGGCGCG
GCCGCCGGCT GA
 
Protein sequence
MSEVRIKAEP RTEFGKGAAR RVRRAGKVPA VLYGHGTPPR HISLPGHELM LALKTPNVLL 
RLEGLEGPDD GELALPKAVQ RNVVTGFLEH VDLLLVRRGE QVEVDVPLRF VGTHAPGGVL
EEHLVALPVR ADATRIPEEI EVSLDGLEIG GSIYVRDVRL PDGVTAAAEP DEVVVHLLPA
LTASELAEAV EGATETGAGA AAG