Gene Acel_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1917 
Symbol 
ID4486594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2166737 
End bp2167489 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content71% 
IMG OID639730708 
Productpolysaccharide deacetylase 
Protein accessionYP_873675 
Protein GI117929124 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAACG GCCTCGCGCG TGCGTGGCGG CTGCGGACCA TGCTTCCGCC CGAGTGGCGA 
AGCCGAGCGC GGCACGTCGT CGATGCGTGC GGCAGGCCGA TTGGCTCACT CCACGCGGCC
TCGGTGACGG GGCTGGTGGG TCTCACCGTG GACGACGGTC CCGACCCACA CTGGACGCTG
CCGCTGCTTG ACGTCTTGGC GGCACACGGC TGCCGGGCGA CGTTCTTCGT TCTCGCGTAT
CGCGCGCTTC GTTACCCCGA CATTCTCCGC GCGACCGTTG CAGCCGGCCA CGAAATCGCC
CTGCACGGCT GGGACCACAC CAGACTCACC GCCCTGCCGC CGAGCGAGGT GTTGGCGCGA
AGCCGGCACG CCAAGGCGGT GGTCGAAGAC CTCTCCGGTG CCCCGGTGCG CTGGTTCCGG
CCGCCGTTCG GGGCACAGTC GCTCCGCAGC TACCTGGCGG TCCGCCGGCT CGGCATGGAG
GTGGTCGTCT GGTCGGCGAC GCCGCGGGAT TGGGAGGACG GCGAACCCGA CGAGGTCGCC
GGCCGGGTCC TCGCCGACGT TCGGGACGGC GACATCCTCC TCACCCACGA CGGCGTCGAA
GTCCCCGCTG GCGACTCGGC ACCGACCTTC GACCGGGCCG CGATGTTCGG TGCATTGCTC
GACGGCCTCG CCAGCCGCGG ATTGCGTGCG ACCGCATTGG AGAATCTCGT CCGCTCCGGG
CCGGCTCGGT ACACCGCGTG GTTTCGGCCG TAA
 
Protein sequence
MTNGLARAWR LRTMLPPEWR SRARHVVDAC GRPIGSLHAA SVTGLVGLTV DDGPDPHWTL 
PLLDVLAAHG CRATFFVLAY RALRYPDILR ATVAAGHEIA LHGWDHTRLT ALPPSEVLAR
SRHAKAVVED LSGAPVRWFR PPFGAQSLRS YLAVRRLGME VVVWSATPRD WEDGEPDEVA
GRVLADVRDG DILLTHDGVE VPAGDSAPTF DRAAMFGALL DGLASRGLRA TALENLVRSG
PARYTAWFRP