Gene Acel_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1812 
Symbol 
ID4486283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2053766 
End bp2054755 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content61% 
IMG OID639730602 
Productxylose isomerase domain-containing protein 
Protein accessionYP_873570 
Protein GI117929019 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.617745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTTG GTGTCTATAC TGCCTGCTTG CACGACCGGC CGCTCAGCGA GGCGCTCGAC 
GTTATCCGCG AGCTCGGTCT GAACAGCGCC GAAATCAATT CGGGCGGATT TCTCCCCACC
CCGCACCTGC CGGTACAGAA GCTGCTCGAT AGTCAGAGTG CACGGGACGA CTACCTTGAC
GCTTTTCACT CCCGCGGCCT GACCCTCACC GCGCTAAACT GCAACGGCAA TCCGCTGCAT
CCCGATCCTG AGGTGAGAGA GAAGCACGCC GCGGACCTGC GACGTTCAAT CGAAGTGGCC
GCTGCGCTCG GTGTACGGCG CGTTGTCACC ATGTCGGGTC TGCCGGCCTC TGACCCCGGT
GGTCGCTTGC CGTCGTGGAC AGTTGTCCCG TGGGACAGCG CGTATCTGGA TGTGCGGGAC
TACCAGTGGA ACGACATCGC GATCCCGTTC TGGCGAGAGA TCGACAGGCT CGCCCGGGAT
CACAACGTGC GCGTCTGCAT TGAAATGCAT CCGCACAACA TCGTCTACAA TCCCGTTACA
TTGGTTCGGC TTGTCGACGC TATCGACGCC ACACATGTCG GCGCGGAGAT GGATCCGAGT
CACCTCTTCT GGCAAGGGAT CGATCCGGTG GTGGCGGTTC GTTTTCTTGG AAAGCTGGTC
TACAACGCTG CAGCCAAGGA CACACGCATC AATGCCAAGG TCAATCTTTA CGGCGTCCTC
GACGACCGGT TCAACCGGGT CGCACCTGAT GCTCCTAAGG TGTCTCTAGG CGGACGCTAC
GCGCTCAACC GCTGGCCGGA TGACGCAGCG TGGGATTTCG TAGCGGTCGG CCGTGGTCAC
GATACCGGAT GGTGGCATGA ATTTCTCCGT GCGCTGGCCG AAGTGGATCC GGACATGGCA
GTCAACATTG AGCACGAGGA CAGGGAGCTG GACAGCATGA CGGGCCTCCG GATCGCCGCA
GAAACCCTGC GCATTGCCGC GAAGCCGTAA
 
Protein sequence
MKLGVYTACL HDRPLSEALD VIRELGLNSA EINSGGFLPT PHLPVQKLLD SQSARDDYLD 
AFHSRGLTLT ALNCNGNPLH PDPEVREKHA ADLRRSIEVA AALGVRRVVT MSGLPASDPG
GRLPSWTVVP WDSAYLDVRD YQWNDIAIPF WREIDRLARD HNVRVCIEMH PHNIVYNPVT
LVRLVDAIDA THVGAEMDPS HLFWQGIDPV VAVRFLGKLV YNAAAKDTRI NAKVNLYGVL
DDRFNRVAPD APKVSLGGRY ALNRWPDDAA WDFVAVGRGH DTGWWHEFLR ALAEVDPDMA
VNIEHEDREL DSMTGLRIAA ETLRIAAKP