Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1704 |
Symbol | |
ID | 4484704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1917946 |
End bp | 1918572 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639730494 |
Product | hypothetical protein |
Protein accession | YP_873462 |
Protein GI | 117928911 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.77077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00529814 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCTACCC GCCTCGCGTC CGTGCGCGGA GAGTGTTCAC ACTCATGGCT TCTTTCTCGG CATGATGAAG ACATGGAGAC CTCCTTGGCA GGCCGGCTTC TCGTTGCAGC GCCGACGTTG GAGGATCCGA ATTTCGCGCG GACGGTGGTC CTGCTTCTCG ACCACGATGA GGATGGTGCG TTCGGCGTCG TCCTGAATCG TCCCAGCTCG GTACCCGCCC GGGAAGCGGT CCCGCAATGG GCGGACATCG TGAGTGCACC GGGCGTCGTG CACCTGGGCG GCCCGGTTAC TCCGGAGGCT GTGGTCTGTC TCGGCCGGGT ACGCGCCGGG GTGCCGGCGG CCGGCTGGAT TCCCTTGGTC GGGCCGTTTG GTGCCGTCGA TCCAGAGGCC GAACCTGACA TGATTGCGGA CGCGCTGGAC GGATTGCGGC TCTTCGCTGG TTACGCGGGC TGGGCGCCGG GTCAGCTGGA AACCGAACTC CGGCTGGGTG GTTGGCTGGT GTGTCGGGCG GAGCCCGATG ACGCATTCAG CCCCGAGCCG CAGACCCTCT GGTCGCGGGT GTTGCGGCGC CAAGGCGGCG AGCTTGCCTT GCTCGCCACC ATGCCGGCGG ATCCGACCCG GAATTAG
|
Protein sequence | MPTRLASVRG ECSHSWLLSR HDEDMETSLA GRLLVAAPTL EDPNFARTVV LLLDHDEDGA FGVVLNRPSS VPAREAVPQW ADIVSAPGVV HLGGPVTPEA VVCLGRVRAG VPAAGWIPLV GPFGAVDPEA EPDMIADALD GLRLFAGYAG WAPGQLETEL RLGGWLVCRA EPDDAFSPEP QTLWSRVLRR QGGELALLAT MPADPTRN
|
| |