Gene Acel_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1704 
Symbol 
ID4484704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1917946 
End bp1918572 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID639730494 
Producthypothetical protein 
Protein accessionYP_873462 
Protein GI117928911 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.77077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00529814 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTACCC GCCTCGCGTC CGTGCGCGGA GAGTGTTCAC ACTCATGGCT TCTTTCTCGG 
CATGATGAAG ACATGGAGAC CTCCTTGGCA GGCCGGCTTC TCGTTGCAGC GCCGACGTTG
GAGGATCCGA ATTTCGCGCG GACGGTGGTC CTGCTTCTCG ACCACGATGA GGATGGTGCG
TTCGGCGTCG TCCTGAATCG TCCCAGCTCG GTACCCGCCC GGGAAGCGGT CCCGCAATGG
GCGGACATCG TGAGTGCACC GGGCGTCGTG CACCTGGGCG GCCCGGTTAC TCCGGAGGCT
GTGGTCTGTC TCGGCCGGGT ACGCGCCGGG GTGCCGGCGG CCGGCTGGAT TCCCTTGGTC
GGGCCGTTTG GTGCCGTCGA TCCAGAGGCC GAACCTGACA TGATTGCGGA CGCGCTGGAC
GGATTGCGGC TCTTCGCTGG TTACGCGGGC TGGGCGCCGG GTCAGCTGGA AACCGAACTC
CGGCTGGGTG GTTGGCTGGT GTGTCGGGCG GAGCCCGATG ACGCATTCAG CCCCGAGCCG
CAGACCCTCT GGTCGCGGGT GTTGCGGCGC CAAGGCGGCG AGCTTGCCTT GCTCGCCACC
ATGCCGGCGG ATCCGACCCG GAATTAG
 
Protein sequence
MPTRLASVRG ECSHSWLLSR HDEDMETSLA GRLLVAAPTL EDPNFARTVV LLLDHDEDGA 
FGVVLNRPSS VPAREAVPQW ADIVSAPGVV HLGGPVTPEA VVCLGRVRAG VPAAGWIPLV
GPFGAVDPEA EPDMIADALD GLRLFAGYAG WAPGQLETEL RLGGWLVCRA EPDDAFSPEP
QTLWSRVLRR QGGELALLAT MPADPTRN