Gene Acel_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1644 
Symbol 
ID4486697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1848224 
End bp1849177 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content60% 
IMG OID639730431 
Productglutaconate CoA-transferase 
Protein accessionYP_873402 
Protein GI117928851 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGT CGGTGGACTT CCGGTCCGTT CGCTGGGAAC TCGAGGCGAC CGACCGGCGG 
ATGCTTGACA AGCGCATGTC GGCCACTCAG GCGATGGAGC TTGTTCATGA TGGGGATCAC
GTCGCAATCG GCGGTACCTT GTACTCACGA ACACCCATGG CCCTTGTGTT CGCGCTCTTG
AAGACGCGGC GCCGCCACCT GACAATCTCT CGACCTCTCA CGTGCTACGA GGCGGAGCTA
TTTTATGCGG CAGGGATGGC CGATCGCGTG ATTACGAGCT GGATCGGCAT CGGTTTAAAA
TGGGGCTTGC CGCAGATCAT GCGACATTAC GTCGAGACAG GACAGGCTGT CTACGAGGAG
TGGAGTCATC TAGGCATAGG CCTGCGTTAC AAGGCAGGTG CAATGGGTGT GCCGTTCCTT
CCAGCGCTGA CGATGCTCGG ATCAGACATC GCGCGGACCG TTGAGTTGCG CGAGGTCGAC
TGTCCCTACA CAGGACAGCG GCTCGCTGCA CTACCCGCGC TGAACCCCGA TGTCGCGCTG
ATTCACGCGC ATCGATCCGA TATCTACGGG AACGTTCAGG TGGACGGCTA TCGCCACATG
GATGTGGACA TGGCTCGAGC GGCGCGGCGC GTCATTGTGA GCGTCGAGCA GATCGTGAGC
AGCGACGAGA TCCGGGCTTT ACCGACCACG ACGATTCTTC CGCACTTCGC GGTTGATGCT
ATCGTCGAGG CACCGTTCGG CGCATATCCC AGTGAGTGTT ACGGCCTCTA TCATGCCGAC
CTCCGGCACT TCGACGAATA CGTCAATTTA GTGAAGGCGA AAGGCCCAGA TGGCGCACGA
GAGTACATTG CCGAGCATGT GGATCAGCAT GACGACTTTG CCGGCTTTCT GGCCTCCCTG
CCACCCGGCA CACTTGATGA TCTCGTCGCT GCTGCGAAGA GGTTGGCGCC GTGA
 
Protein sequence
MSASVDFRSV RWELEATDRR MLDKRMSATQ AMELVHDGDH VAIGGTLYSR TPMALVFALL 
KTRRRHLTIS RPLTCYEAEL FYAAGMADRV ITSWIGIGLK WGLPQIMRHY VETGQAVYEE
WSHLGIGLRY KAGAMGVPFL PALTMLGSDI ARTVELREVD CPYTGQRLAA LPALNPDVAL
IHAHRSDIYG NVQVDGYRHM DVDMARAARR VIVSVEQIVS SDEIRALPTT TILPHFAVDA
IVEAPFGAYP SECYGLYHAD LRHFDEYVNL VKAKGPDGAR EYIAEHVDQH DDFAGFLASL
PPGTLDDLVA AAKRLAP