| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1543 |
|---|
| Symbol | |
|---|
| ID | 4485216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1740792 |
|---|
| End bp | 1741556 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639730327 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_873301 |
|---|
| Protein GI | 117928750 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.358584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGCGG CTACGACACC GTCGACGTCC AGCCAGGTGC GCGCCGTACC GCCCGTGGCG
CCGCTGCGGG TCCTCCGCCG GTTTGACCCA CCGACCCAGC CGTGGCTGGC CGGTCACCGG
GGAGTTGATC TCGCGGCGAG CGCGGGCGAA CCCGTTGCAG CGGCCGGATA CGGACATGTC
GTCTTCAGCG GACGGATAGC CGGCCGAGGC GTCGTCTCGA TCAGCGTCGG ATCGATCCGT
TTCACCTACG AGCCGATCGA ACCGGCGGTC GCCGTCGGAG AGATCGTGCG GCCTGGTATG
CCGCTGGGCA CGGTGGCTCG ACAGCCGGAC CACTGCGGGC CGCCGGGCAG CTGCCTGCAC
TGGGGAGCAA TCCGCGACGG ACGCTACGTG GACCCGCTGC TGTTCCTCCG CCACGTGCGG
CTGCTGCCCC TCGCGGCGAC GCCGCCGGCC GCCTCCGACG CACTCGATCT CACCTCCGAT
GCGATCGGTC CGTTCTCCGA CACGCTCGGT CGTGCTTCCG ACCCGCTCGG CCGCCCGTTG
TCCGGCCATC CGGTGCCTGC GGAGGGACCC ACGCCGCTGA GCCGCGCGCG CCCGGCGACA
AGCCGATCCC CCACCGAACC GGACGTCGCG CCGCGAGCGA CCCGAGCAGG CGGGACACCG
CTGTCACCCG ACACATTCGT CCCCACCCTT TTTGCGACCG CGGGACTTGC CGTCGCAGCC
GCCACGATCT CGAGACGGCG GTTTCGACCG CACCACCGCG GATGA
|
|---|
| Protein sequence | MPAATTPSTS SQVRAVPPVA PLRVLRRFDP PTQPWLAGHR GVDLAASAGE PVAAAGYGHV
VFSGRIAGRG VVSISVGSIR FTYEPIEPAV AVGEIVRPGM PLGTVARQPD HCGPPGSCLH
WGAIRDGRYV DPLLFLRHVR LLPLAATPPA ASDALDLTSD AIGPFSDTLG RASDPLGRPL
SGHPVPAEGP TPLSRARPAT SRSPTEPDVA PRATRAGGTP LSPDTFVPTL FATAGLAVAA
ATISRRRFRP HHRG
|
|---|
| |