Gene Acel_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1537 
SymbolglyA 
ID4485210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1734669 
End bp1735952 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content65% 
IMG OID639730321 
Productserine hydroxymethyltransferase 
Protein accessionYP_873295 
Protein GI117928744 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.54072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAT CCCCTGACCC TCTCGCCGCT CTCACCGCCA CGGATCCCAC GATCGCTGAC 
CTGATCCGGG CCGAAGAACG GCGGCAGTCC GAGAAAATTC GGCTGATTCC GTCGGAGAAC
TACGTCTCCA AAGCGGTCCT GGAGGCGACG GGGACGGTGC TCACCAACAA GTACTCCGAG
GGTTACCCGA ACCGCCGCTA TTACGAAGGG CAGCAATTCA TCGATCAGAT CGAGACGATT
GCCATCGAGC GGGCCAAACA GCTGTTCGGG GTTGATCACG CCAATGTGCA GCCGTACTCC
GGATCTCCCG CGAACCTGGC CATTTACCTG GCCCTGCTCT CCCCCGGCGA CACCGTCATG
GGCATGGCGT TGCCGATGGG CGGACACCTC ACCCACGGCT GGCCCGTATC GGCCACCGGC
ATCTGGTTCC GCTCGGTCCA ATACGGCGTG CGGCGCGACA CCGGTCGCAT TGATTTCGAT
GAGGTCCGCG AGGTGGCCCG GCGAGAGCGG CCGAAGGTAA TTTTCGCCGG CGGGACGGCG
ATTCCGCGCA TCATCGATTT CGCCGCGTTC GCAGAGATCG CCCGCGAAGT GAACGCTGTC
CTCGTCGCCG ATATCGCGCA CATCTCCGGG CTCGTCGCCG GCGGGGTGCA CCCGTCGCCG
GTGGGACATG CCGACATCAT TTCCACCACC ACGCACAAGA CGCTTCGCGG TCCGCGCGGT
GCGATGCTGA TGAGCACCGA GCAGTATGCG AAAGCGCTGG ACAAGGCGGT CTTCCCAGGA
TTGCAGGGTG GCCCGCACAA TCACACCACG GCGGCTATCG CGGTTGCCCT CCTCGAGGCG
ATGCAACCCG AATTCCGCGA CTACGCCCGG AACATCGTCG CCAACGCGGC CGTTCTCGCC
GAGGAGCTCC TCGCCCGTGG CTTCGACCTT GTCTCCGGCG GCACCGACAA TCACCTCATC
CTGGTGGACC TCACCTCAAA AGGTGTGGCG GGCAAGCCGG TTGCGCGGGC CCTCGACCGG
GCCGGCATCG AACTCAACTA CAACACCGTG CCGTTCGACC CTCGCAAGCC GTTTGACCCG
TCGGGAATCC GGCTCGGCAC CCCGGCGGTG ACGTCCCGCG GAATGGGTCC CGCGGAAATG
CGGCAAATCG CCGCCTGGAT CGATGAGGTG ACCACCGCCG TCGCCAAAGG AGATGAGGAA
GCACTGGCCG CCGTTGAACA GCGGGTGGCG GGCGAGGTCC GCGAATTGAC GAAGAATTTC
CCCACCCCCG GGCTGGACCG CTGA
 
Protein sequence
MNSSPDPLAA LTATDPTIAD LIRAEERRQS EKIRLIPSEN YVSKAVLEAT GTVLTNKYSE 
GYPNRRYYEG QQFIDQIETI AIERAKQLFG VDHANVQPYS GSPANLAIYL ALLSPGDTVM
GMALPMGGHL THGWPVSATG IWFRSVQYGV RRDTGRIDFD EVREVARRER PKVIFAGGTA
IPRIIDFAAF AEIAREVNAV LVADIAHISG LVAGGVHPSP VGHADIISTT THKTLRGPRG
AMLMSTEQYA KALDKAVFPG LQGGPHNHTT AAIAVALLEA MQPEFRDYAR NIVANAAVLA
EELLARGFDL VSGGTDNHLI LVDLTSKGVA GKPVARALDR AGIELNYNTV PFDPRKPFDP
SGIRLGTPAV TSRGMGPAEM RQIAAWIDEV TTAVAKGDEE ALAAVEQRVA GEVRELTKNF
PTPGLDR