Gene Acel_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1390 
Symbol 
ID4486530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1550119 
End bp1550796 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID639730174 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_873148 
Protein GI117928597 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGT TGGCCGAGCA CGTGCCGCCC CAGCCGGGGA ACTCCGCGGG TTTCACCGCA 
ATGGTGGTCG ACGACCACCC GTTGGTCCGC GAATCCATGG TGAGCCGGCT CACCGCGATG
GGGGCGCGGG AGGTGATAGA AGCGGCCAGT TGCGCCGAGG CCAGGGCCCG GGCCCGGTCG
GTCGGACCGT GCGACGTCTG CATCGTGGAC GTCGGCCTCC CCGACGGTTC AGGGCTCGAT
TTGATCGCTG AACTGCGGGC CGCGGGATGG CCCCGGCTCG TCGTCCTCTC CGCCGCTGAC
GACCCGTACT CGGTGCGCGC AGCCTTTGTC GCGGGCGCGC AGGGGTATCT GCTGAAATCC
GCCTCGCCGG TGGTGGTCAC CGACGGGGTG CGCCGAGTGC TGGACGGCGG TGTGTACGCC
GACCCCGCCG TGGCCTCCCT CCTGGCGGCT GGGCTGCGCA ACAACGCCAG CAACGAAGGC
ATCGGTGACC TCTCCAGCCG GGAGATCGAG GTACTCCGGT TGGTCGCCGA CGGTCGGTCC
AACAAGGAAA TCGGGGACCA GCTCGGACTC TCGGCACTGA CCGTCAAGAG CCACCTGGCC
CGCATCGCCC GCAAGCTCGG CACTGGGGAC CGCGCCGAGA TGGTGGCGCT CGCGATGCGC
GCCGGCATCA TTCGGTGA
 
Protein sequence
MTALAEHVPP QPGNSAGFTA MVVDDHPLVR ESMVSRLTAM GAREVIEAAS CAEARARARS 
VGPCDVCIVD VGLPDGSGLD LIAELRAAGW PRLVVLSAAD DPYSVRAAFV AGAQGYLLKS
ASPVVVTDGV RRVLDGGVYA DPAVASLLAA GLRNNASNEG IGDLSSREIE VLRLVADGRS
NKEIGDQLGL SALTVKSHLA RIARKLGTGD RAEMVALAMR AGIIR