Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1390 |
Symbol | |
ID | 4486530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 1550119 |
End bp | 1550796 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639730174 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_873148 |
Protein GI | 117928597 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGGCGT TGGCCGAGCA CGTGCCGCCC CAGCCGGGGA ACTCCGCGGG TTTCACCGCA ATGGTGGTCG ACGACCACCC GTTGGTCCGC GAATCCATGG TGAGCCGGCT CACCGCGATG GGGGCGCGGG AGGTGATAGA AGCGGCCAGT TGCGCCGAGG CCAGGGCCCG GGCCCGGTCG GTCGGACCGT GCGACGTCTG CATCGTGGAC GTCGGCCTCC CCGACGGTTC AGGGCTCGAT TTGATCGCTG AACTGCGGGC CGCGGGATGG CCCCGGCTCG TCGTCCTCTC CGCCGCTGAC GACCCGTACT CGGTGCGCGC AGCCTTTGTC GCGGGCGCGC AGGGGTATCT GCTGAAATCC GCCTCGCCGG TGGTGGTCAC CGACGGGGTG CGCCGAGTGC TGGACGGCGG TGTGTACGCC GACCCCGCCG TGGCCTCCCT CCTGGCGGCT GGGCTGCGCA ACAACGCCAG CAACGAAGGC ATCGGTGACC TCTCCAGCCG GGAGATCGAG GTACTCCGGT TGGTCGCCGA CGGTCGGTCC AACAAGGAAA TCGGGGACCA GCTCGGACTC TCGGCACTGA CCGTCAAGAG CCACCTGGCC CGCATCGCCC GCAAGCTCGG CACTGGGGAC CGCGCCGAGA TGGTGGCGCT CGCGATGCGC GCCGGCATCA TTCGGTGA
|
Protein sequence | MTALAEHVPP QPGNSAGFTA MVVDDHPLVR ESMVSRLTAM GAREVIEAAS CAEARARARS VGPCDVCIVD VGLPDGSGLD LIAELRAAGW PRLVVLSAAD DPYSVRAAFV AGAQGYLLKS ASPVVVTDGV RRVLDGGVYA DPAVASLLAA GLRNNASNEG IGDLSSREIE VLRLVADGRS NKEIGDQLGL SALTVKSHLA RIARKLGTGD RAEMVALAMR AGIIR
|
| |