| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1368 |
|---|
| Symbol | |
|---|
| ID | 4486260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1522717 |
|---|
| End bp | 1523586 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639730148 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_873126 |
|---|
| Protein GI | 117928575 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.20656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.169668 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAATC GCCCGATCCG CCGACGACAG ACGTCAACCA CCGGAACACG TACGGCGGCG
AAAGCGGAAG CCGGGCACAA CCGAAGCCTT GCCGGCGTCG GCGGTCGGTT CCGCACCGCC
TGGCGCAGCG AACGTCCACA CGCGGCGGCG GCAATGGCCA CGGCGATTCG GGTGGTCAAC
CAGCTGCGGC GCGACCACCG GACACTTGCC CTGATACTCG TCATGCCACC AGGAATCCTC
GCCCTGTTCC GGTACGTCTA CGACGCACAT CCAGCTATTT TTGCTCGCAT CGGCGCGCCG
CTGCTCGGGA TTTTCCCACT CGTCATCATG TTCGTCGTCA CGTCCATCGC GATGCTCCGC
GAGCGCCGGA CCGGAACCCT CGAACGGCTC ATGACACTTC CCATCGCGAA AATCGACATT
CTTGCCGGGT ACGCACTTGC ATTCGGTGCC GTTGCGGTCG TGCAAACCGT CGTTGCCGTG
GCAATCGGCG TCGGACTTCT CGACGTACAC ACCCACGGTC ACACGACGGC ACTTGCCGCC
TTGGCGATTC TCGCCGCACT CTTCGGCATG GCGTTCGGAC TTTTCGTCAG CGCCTTCGCG
CGCACGGAGT TCCAGGCGGT CCAATTCATG CCCGCGCTGC TCTTTCCGCA ACTCATTCTC
GGCGGACTCT TTGCGCCGCG GGACGAGTTT CCCCGCGTCC TGGAAATAGT CTCCGACATC
CTCCCCTTGA GCTACGTGTA CGACGCCGTG GTGCGCGCTC TGGCAGGCGA TTCGAGCGGC
CTTTTCTGGC GGGACGTCGG AATAATCGCC GGCGCCACTG TGGTCGCGCT CCTGCTGGGC
GCGGCGACGC TGCGTCGTCG TACCCGTTAG
|
|---|
| Protein sequence | MTNRPIRRRQ TSTTGTRTAA KAEAGHNRSL AGVGGRFRTA WRSERPHAAA AMATAIRVVN
QLRRDHRTLA LILVMPPGIL ALFRYVYDAH PAIFARIGAP LLGIFPLVIM FVVTSIAMLR
ERRTGTLERL MTLPIAKIDI LAGYALAFGA VAVVQTVVAV AIGVGLLDVH THGHTTALAA
LAILAALFGM AFGLFVSAFA RTEFQAVQFM PALLFPQLIL GGLFAPRDEF PRVLEIVSDI
LPLSYVYDAV VRALAGDSSG LFWRDVGIIA GATVVALLLG AATLRRRTR
|
|---|
| |