| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1362 |
|---|
| Symbol | |
|---|
| ID | 4486254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1516854 |
|---|
| End bp | 1517678 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639730142 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_873120 |
|---|
| Protein GI | 117928569 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.159934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.110996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGA GACGTCAGGA AACCCTCATC AGCAGCGTCT TACTCGCTGC TGTCTTCGTG
GTCACCTTGC TACCCTTCGC CAGCCTCTTC ACCACTGCAC TGCACACGTC AGGCACGTAC
CCCACGGGGC TCAGCTGGCC GAAGCATCCG CAATGGCACA ACTTCGTCGA CGCGTTCCAT
GCCGCCGACA TGGGGGCGAT TTTCCTCTCC AGTACAAGCA TTGTGCTCGG CGTCGTACCA
GTCGCGATCG TGCTTGCCAC ACTCGCCGGT TTCGCGTTAG GCCATCTGCG GCCGCGAGGC
GGGCGCGCGG CGTTCGCGGT CTTTCTTGCC GGGCTGACCC TCCCGTTGGA GGGCGTCATC
GTCCCGCTGT ATTACGAGAT CCGCGATTTT CACCTCTTGA ACACCCGGTT TGCTATTATC
CTGCCGCTTA TCGGCCTCTA CATGCCGTTC GCCGTCTACT GGATGCGCGC GCACTTCCTG
GCGATGCCCA ACGAGTTGTC CGAAGCCGCC CGCATCGACG GCGCCACGAC GTGGCAGCTC
TTCTGGCGGA TACATCTGCC GCTCGCCCGT CCCGCCGTGA CGGCACTCGG CATTCTCCTG
ACAATTTGGA CGTGGAATCA GTTCTTGTTG GCGATCGTCC TGGTGGACGA TCCGAAGAAG
CGCACGATGG CGGGTGCGCT CGGCGCATTC CAAGGCCAGT GGGGAACAAA TATTCCACTG
CTCGCTGCCG GTGCGCTGTT TATTCTTACA CCCATGCTCA TCGTATTCCT CATATTCCAG
AGAAACTTTG TCGTTGCTCT GCTGCAAGGA TCGGTGAAGG GCTAG
|
|---|
| Protein sequence | MTERRQETLI SSVLLAAVFV VTLLPFASLF TTALHTSGTY PTGLSWPKHP QWHNFVDAFH
AADMGAIFLS STSIVLGVVP VAIVLATLAG FALGHLRPRG GRAAFAVFLA GLTLPLEGVI
VPLYYEIRDF HLLNTRFAII LPLIGLYMPF AVYWMRAHFL AMPNELSEAA RIDGATTWQL
FWRIHLPLAR PAVTALGILL TIWTWNQFLL AIVLVDDPKK RTMAGALGAF QGQWGTNIPL
LAAGALFILT PMLIVFLIFQ RNFVVALLQG SVKG
|
|---|
| |