Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1299 |
Symbol | |
ID | 4485454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1449581 |
End bp | 1450768 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639730079 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_873057 |
Protein GI | 117928506 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.161991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00596115 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCGGGG GCAACGGGTC TGTGCCCACC GCGGTTCCCG CCGGCACGTC GCTGCGGGCC CGACCGCCGG CGGTCCTCGT CCTGGAGGAC GGGCGGACCT TCCACGGCCG GGCGTACGGC GTGATCGGTG AGACGTTCGG TGAGGCCGTG TTCGCCACCG GCATGACGGG CTACCAGGAG ACGCTCACCG ATCCGAGCTA CCACAAGCAG GTCGTCGTCA TGACGGCGCC GCACATCGGC AACACCGGCG TGAACGACGA AGACCCCGAA TCCGCGCGGA TCTGGGTGAG CGGATACGTC GTCCGTGACC CGGCGCGGAT CCCGTCGAAT TGGCGAGCGC AGCGCACCCT CGATGACGAG CTCGCCCGGT ACGGCGTCGT CGGAATCTGC GGCATTGATA CGCGGGCGTT GACTCGGCAC CTGCGCGAAC GCGGTGCGAT GCGGGTGGGG ATTTCCAGCA TTGACCCGGA TCCGCAGGCG CTATTGGAGA AAGTGCTGGC TGCTCCGTCA ATGGTCGGTG CCGACCTTGC TGAAGAGGTC TGCACCCGCG AACCGTACGT GGTACCGGCG CAGGGAGCGA AACGGTTCAC CGTCGCCGCG GTCGACCTCG GCATCAAGGC AATGACGCCG AAACTCATGG CGCAGCGGGG AATCGACGTC CACGTGTTGC CGGCGTGGGC GACCATCGAT GACATTCTTG CGTGCGAGCC GGACGGCGTA TTCTTCTCCA ACGGTCCCGG CGACCCGGCG GCCACCACCG GGCCGGTGCG GGTGCTCGGG GAGGTTCTGG CGCGCCGCAT TCCGTTCTTC GGTATTTGCT TTGGAAACCA ACTCCTCGGC CGCGCGCTGG GATTCGGTAC GTACAAATTG CGGTACGGGC ATCGCGGCAT CAACCAACCG GTCGCTGACC GGCGTACCGG GAAGGTGGAG ATCACGGCGC ATAACCACGG TTTCGCGGTC GACGCTCCGC TGGATGGCAT CGCCGAGACA CCGTTCGGGC GGGTGCGGGT GAGCCACGTC TGCCTCAACG ACGGGGTGGT CGAGGGCCTG GAATGCCTGG ATGTACCGGC ATTCTCCGTG CAATACCATC CGGAAGCCGC CGCCGGGCCG CACGACGCCG GGTATCTCTT CGACCGCTTC GTTCACCTGA TGTCCACAGG ACGGCTCGAC GACGAAGGGA CGTGCTGA
|
Protein sequence | MTGGNGSVPT AVPAGTSLRA RPPAVLVLED GRTFHGRAYG VIGETFGEAV FATGMTGYQE TLTDPSYHKQ VVVMTAPHIG NTGVNDEDPE SARIWVSGYV VRDPARIPSN WRAQRTLDDE LARYGVVGIC GIDTRALTRH LRERGAMRVG ISSIDPDPQA LLEKVLAAPS MVGADLAEEV CTREPYVVPA QGAKRFTVAA VDLGIKAMTP KLMAQRGIDV HVLPAWATID DILACEPDGV FFSNGPGDPA ATTGPVRVLG EVLARRIPFF GICFGNQLLG RALGFGTYKL RYGHRGINQP VADRRTGKVE ITAHNHGFAV DAPLDGIAET PFGRVRVSHV CLNDGVVEGL ECLDVPAFSV QYHPEAAAGP HDAGYLFDRF VHLMSTGRLD DEGTC
|
| |