Gene Acel_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1193 
Symbol 
ID4485515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1328000 
End bp1329136 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content66% 
IMG OID639729969 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_872951 
Protein GI117928400 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.378059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACG ACGAGGAATT CGAGGCGCTT CGGCGGGAGG TCGAGGAGTT CGTCCGCGGA 
CCGGGGGAGC GGTACGCCGA ACAGATCGAA GCCGAGAACC GGGTGCCGGA GAGCCTCTGG
ACGGAACTTC GGGACCGCGG TTACCTTCGG CTTGCGGCGC CCCAGGAGTA CGGCGGACGG
GGACTGCAAT TCTCCAAATA CCTCGAGCTC GTCGAGCTCT TCGCGATGTC CCACGCCTCG
CTCCGGATGA TTGTGCATGT CGTCAACGGC ATTTGGCGGG CCATCGACCA GCTCGCAACC
GACGAGCAGC GCAAGAAATT CGTCCTTCCA CAGGTTGCCG GCGATATCCG GGTGGCCTTC
ACCCTCACCG AGCCGACAGC CGGCACCGGA GCGGATATCC GGAGCACCGT GGTGCGGGAC
GGCGACACGT ACTACCTCAC CGGGGAAAAG CACCTCATCA CGTTCGGCGT CCGGTGCGAT
TATTGGCTCC TCTTCGCCCG TGTCGCCGGC ACCACGGGCA AGGACGGCAC CGTCGCGCTC
ATGGTCGACC GGCATTCACC GAACGTCGTC GTGAAAGAAA TGTCACCGTC GATGGGGGTG
CGGGGCACGG ACCACGCCCA CCTCATCTTC CGGGAGACAC CGGTGCCGGT CGCCAACCGC
CTCGGCGCCG AAGGGGAAGG GTTGGACGTC GCGTTCGGCG GTTTCCTCAC ACCGAGCCGG
ATCTCGGTCG CCATGACGTG CGTCGGCTTG GCCCGCCGGG CCCAGGAACT CGCCGTCGAG
TACGCCAAGC AGCGGGTCAC CTTCGGCAAG CGGCTCGCGG ACCGGCAAGT CATCGCCTAC
GCCCTCGCCG AGAACGCCAC CGATATCGAA GCGGCGCGGC AGTTGACCCT GTACGCCGCC
CGGCAGTGGG AGAGCGGTGC CGCCGATGCG CTCACCCTGT CCTCCATGGC GAAGCTCAAC
GCCGTCGACA TGCTCACCCG CGTGACCGAC AAAGCCCTCC AGATTCACGG CGGCATCGGG
TATTTCCAGT CGAGTCCCAT CGAACGCGTG TACCGCGACG CCCGCGCCCA GCGTTTCGAG
GAAGGCACGA ACGAAATTCA GAAAACGGTG ATCGCCCGAT CCGTCCTCGG TGCATGA
 
Protein sequence
MNDDEEFEAL RREVEEFVRG PGERYAEQIE AENRVPESLW TELRDRGYLR LAAPQEYGGR 
GLQFSKYLEL VELFAMSHAS LRMIVHVVNG IWRAIDQLAT DEQRKKFVLP QVAGDIRVAF
TLTEPTAGTG ADIRSTVVRD GDTYYLTGEK HLITFGVRCD YWLLFARVAG TTGKDGTVAL
MVDRHSPNVV VKEMSPSMGV RGTDHAHLIF RETPVPVANR LGAEGEGLDV AFGGFLTPSR
ISVAMTCVGL ARRAQELAVE YAKQRVTFGK RLADRQVIAY ALAENATDIE AARQLTLYAA
RQWESGAADA LTLSSMAKLN AVDMLTRVTD KALQIHGGIG YFQSSPIERV YRDARAQRFE
EGTNEIQKTV IARSVLGA