Gene Acel_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1142 
Symbol 
ID4484630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1269143 
End bp1271089 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content66% 
IMG OID639729917 
ProductABC transporter related 
Protein accessionYP_872900 
Protein GI117928349 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0578394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC TCGGCGGCGT CGGCGGAATG GGCGGCGCAT GGCATGGCAT GCGATCGTTC 
ATGCAAGATC GCTCGGTGGT GAACAAGCGG CTCGCGCCGG GCACGATTCG CCGGATCATC
CGGTTCGCCA AGCCCTACCG CTGGCTAGTG ATCACGCTTG TCACCCTGCT CGGGGTTGAC
GCCGCGCTGG GCTCGGTCAA TCCGTTGCTC TTCCGCGAAA TCATCAACAA GGGAGCGCTC
GGCCACCGGC CGGGACTGGT CGTCGTCCTC GCCCTGGCGG TTGCCGCGAT CGCCGTCGTG
GACGCCGGGC TCATGCTCGT CGAACGCTAC TTCTCCGCCC GGATCGGCGA AGGCTTGATC
TTCGACATGC GGTCACGGGT GTTCGGCCAC GTCCAGCGGA TGCCGATCGC CTTCTTCACC
CGGACGCAGA CCGGAGCGTT GATCAGCAGG CTGAACAACG ACGTCCTTGG GGCCCAGCAG
GCATTCACGT CCACTCTCTC CAGCGTGGTG AGCAACCTGC TCAGCGTCGG TTTCACCCTC
GGGGTGATGT TTGCGCTCTC CTGGCAGATC ACCCTGGTGG CGCTTGCACT CCTGCCGATC
TTCGTGGTGC CGGCCCGCTG GTTCGGCCGG AAACTGCAGG CCATCACCCG CGAGAGCTAC
AACCTGAACG CGGCGATGAA CACGATGATG ACCGAGCGGT TCAACGTCGC GGGCGCCCTG
CTGGTCGCGC TCTTCGGCCG CCGGGAGGAG GAGGATGCCA CTTTTCAAGC CAAAGCCGGC
CGGGTCCGGG ACATCGGCGT CACGCAAGCC ATGTACGGCG TGGTCTTCTT TGCCTCGCTC
ATGCTCGTCG CGTCGCTGGG AACCGCGCTG GTCTATGGCT GGGGTGGGTG GCAGGCTGCC
GTCGGCCGGT TGGACGTCGG GACTGTCGTG GCGCTGGGTG CGTACCTCAC CCGCCTGTAC
GGGCCGCTCA CCGCGCTGTC CAACGTCAAT GTGTCGATCA TGACGGCATT GGTGTCCTTT
GAGCGGGTCT TTGAAGTGCT CGACCTTCCG CTGGCGATCG CGGATGCCCC AGGCGCGGTC
GAGCTTGACC CGCAGCAGGC ACGGACCATC GAGTTCGATC ACGTGACGTT CCGGTATCCC
GCCGCGAGCG AGGTCTCGCT TGCCTCCCTG GAGTCGGTGG CCGTGCTGGA CGCCAAGCCG
GGTGAGATCG TCCTGCGTGA CGTGTCGTTC CGCGCGGAAC CGGGACAGCT CGTCGCCCTG
GTCGGTCCTT CCGGGGCCGG CAAGACAACG ATCGCATCGC TGGTGCCCCG GTTGTACGAC
GTCACCAGCG GCGCGGTCCG GGTCGGCGGA ATCGACGTCC GGAACGTGAC GCTTGCCTCG
TTGCGCCGGG TCGTCGGCGT CGTGACGCAG GACAGCCACT TGTTCCACGA CACCATCCGG
GCGAATCTGC TCTACGCGAA TCCGCACGCG ACCGAGGCGG AGCTCATCGA CGCGTGCAAG
GCGGCGCAGA TTTGGGACCT CGTGTCGTCG TTGAAAGACG GCCTCGACAC TGTGGTGGGG
GACCGCGGCT ACCGGCTCTC CGGCGGGGAG AAGCAGCGGC TGGCCATCGC CCGGTTACTG
CTGAAGAAAC CGAGCATCGT CGTGTTGGAC GAAGCGACCG CCCACCTGGA TTCCGAATCG
GAAGTCGCGG TGCAGCGGGC GCTGAAGACG GCCTTGTCGG GACGGACGTC GCTTGTGATC
GCTCACCGGC TCTCCACCAT CCGGGACGCG GATCTCATTC TGGTCATCGA CGAGGGCCGG
ATCGTCGAAC GCGGTACGCA CGAGGAGCTG CTCGCACGCA ACGGGCTCTA TGCCGAGCTG
TACCGCACCC AGTTCGCCGC GTCGCCGCCC CTGGACTTCG CGGCATCCGG CGAACCGGAC
GCCTCCGAGA TCGCCGGCCT GCGGTAA
 
Protein sequence
MSMLGGVGGM GGAWHGMRSF MQDRSVVNKR LAPGTIRRII RFAKPYRWLV ITLVTLLGVD 
AALGSVNPLL FREIINKGAL GHRPGLVVVL ALAVAAIAVV DAGLMLVERY FSARIGEGLI
FDMRSRVFGH VQRMPIAFFT RTQTGALISR LNNDVLGAQQ AFTSTLSSVV SNLLSVGFTL
GVMFALSWQI TLVALALLPI FVVPARWFGR KLQAITRESY NLNAAMNTMM TERFNVAGAL
LVALFGRREE EDATFQAKAG RVRDIGVTQA MYGVVFFASL MLVASLGTAL VYGWGGWQAA
VGRLDVGTVV ALGAYLTRLY GPLTALSNVN VSIMTALVSF ERVFEVLDLP LAIADAPGAV
ELDPQQARTI EFDHVTFRYP AASEVSLASL ESVAVLDAKP GEIVLRDVSF RAEPGQLVAL
VGPSGAGKTT IASLVPRLYD VTSGAVRVGG IDVRNVTLAS LRRVVGVVTQ DSHLFHDTIR
ANLLYANPHA TEAELIDACK AAQIWDLVSS LKDGLDTVVG DRGYRLSGGE KQRLAIARLL
LKKPSIVVLD EATAHLDSES EVAVQRALKT ALSGRTSLVI AHRLSTIRDA DLILVIDEGR
IVERGTHEEL LARNGLYAEL YRTQFAASPP LDFAASGEPD ASEIAGLR