Gene Acel_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1056 
Symbol 
ID4484838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1166343 
End bp1167155 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content67% 
IMG OID639729831 
ProductABC-2 type transporter 
Protein accessionYP_872815 
Protein GI117928264 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.655499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0850571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGG CGGAGTTTGC GGCTGGGACC AGGTTCCTCC GTCCACGCCG TGACGAAGGC 
GGCACCCGGC CGCGGTTCTG GGATGCCGTT GGTGCGATCT TCTCCGGTCA GGTGGCGCGG
GCCCGCCCGG CGGCGATTCC GATCTTCCTG GCGGCGACGA TGCAATCCGC CGGACTGGTC
GTCCTGCTCA AGGGATTGGT CGCCACCAAC GACGCGGTCA CTGTGCAGTC GGTCGTCTCC
GGCTCGGCGG TCACCGTCGT GTCGTTCGTC GCGCTGAACC TCCTCGCCCA GCGGTTCGGC
CTGCTCAAGG CAACCGACGC GCTGGACTAC TTCGGTGCGT TGCCGATCCC CCCAGCGGCG
CTGGTGATGG GAGTAGCAGC CGCGTGGTCG GCGCTCACCG TCCCCGGTTC ACTCCTGGTC
GCCGTCGGTG GGGCGCTCTT CTACGGGCTG CCGCTCGCAC ACGTCTGGGT CATCGTTCCG
GCCGTCGTGC TTGCCGGTGT CGCCTTGGCG GGGTTCGGCG CGATCATCGG GCTGCTTGCG
CCAAGCCAGG AAATTGCCAC CATCGCCGGT CAACTCGGCA TGGCTCTGGT GATGTTCTTT
GGCCTGGTTC CGTCCGAGCG GCTTCCGGAG TTGCTCCGCG TCATTCGGGT GATCATTCCG
TCGACCTATG CGGTCGACGC CTTCAGTGAA GCATTGCGGC ACCGCCCGAA CTGGATGGTC
ATCGGCGTCG ACCTAGGGGT CTGCGTCGGT GTCGCTATCT TGGTTCTCGC TTGCGCCACC
GTGGCGTATC GGTCTGCCAT CCGCCGCCGG TGA
 
Protein sequence
MTTAEFAAGT RFLRPRRDEG GTRPRFWDAV GAIFSGQVAR ARPAAIPIFL AATMQSAGLV 
VLLKGLVATN DAVTVQSVVS GSAVTVVSFV ALNLLAQRFG LLKATDALDY FGALPIPPAA
LVMGVAAAWS ALTVPGSLLV AVGGALFYGL PLAHVWVIVP AVVLAGVALA GFGAIIGLLA
PSQEIATIAG QLGMALVMFF GLVPSERLPE LLRVIRVIIP STYAVDAFSE ALRHRPNWMV
IGVDLGVCVG VAILVLACAT VAYRSAIRRR