Gene Acel_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1055 
Symbol 
ID4484837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1165342 
End bp1166346 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID639729830 
ProductABC transporter related 
Protein accessionYP_872814 
Protein GI117928263 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.758916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.126684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTA CCGCTCTCAC CGCGGGAATT CCAGCCACGG CCGGCACATC GGTGACTCAG 
GCACTCGAGG CCCGCGGACT CGTCAAGACG TACCGGACCC GGCACGGTCC GATCATCGCC
AACGATGGCA TCGATCTCTC GATACGTCCG GGGCAGATTT TCGGCCTGCT CGGACCGAAC
GGGGCCGGCA AGACCACCCT GGTCCGTCAA CTCGTCGGCC TGCTCCGGCC GGACGCCGGC
CACATCGCCC TCCTCGGCAT CGACGCAACC GCTCACCCCG AGGCCGTGCC CCGGATCGTC
GCCTACCTCC CGCAGCAGGA CACCGCACTG GCCGACCTCA CCGTTGCCCA GGCGGTGCGG
ACGACTGCCG TGCTGCGAGG CATTCCGCGA TCGGCGGCCG GCGGGGAGGC CGCAGCGCTG
CTCGCGGAGC TGGGCCTCGA ACCGCTCGCG GATCGTCGCA TCGGCAAGCT CTCCGGTGGG
CAGCGCCGTC TCGCCGCGGT GGCGGCAACT CTGGCCGGAC GGCGCCCGAT CCTCGTCCTG
GACGAACCAA CCACCGGCCT GGATCCGACG GCCCGGCGGG CTGTCTGGGC AGCGGTGGAG
CGTCGCCGGA CCGAGGCCGG GTGCACGGTC GTGCTGGTGA CCCACAACGT CTTGGAAGCG
GAGACGGTCC TTGACTCCGT GGCCATCCTC GACCAGGGGC GAGTGATCGC TAACGGTACG
CCGGGCGCCT TGAAGGCGAC CCTCGGCGAC GCCGTCCGCT TGGAGCTCGC GTGGCGGGCC
GATCCACCGG AGGACGATCC GCTGATCCGG CGACTCCGGG CAGCCGCGGC GATCCGCGGC
CGGCGATGGA CCGTCCGGTG TTCGTCGGAG GAGGCGCGTG CCGCGTTGGC ACAGTTGACC
AGTGGTGATT TCCTCGACGT CCTTGACGAC TTCACGCTTG CGACTCCGTC GCTGGAAGAC
GTGTACGTCG CCCTCGGCGG GCGCGACCGA TTGGACCGAG AGTGA
 
Protein sequence
MTRTALTAGI PATAGTSVTQ ALEARGLVKT YRTRHGPIIA NDGIDLSIRP GQIFGLLGPN 
GAGKTTLVRQ LVGLLRPDAG HIALLGIDAT AHPEAVPRIV AYLPQQDTAL ADLTVAQAVR
TTAVLRGIPR SAAGGEAAAL LAELGLEPLA DRRIGKLSGG QRRLAAVAAT LAGRRPILVL
DEPTTGLDPT ARRAVWAAVE RRRTEAGCTV VLVTHNVLEA ETVLDSVAIL DQGRVIANGT
PGALKATLGD AVRLELAWRA DPPEDDPLIR RLRAAAAIRG RRWTVRCSSE EARAALAQLT
SGDFLDVLDD FTLATPSLED VYVALGGRDR LDRE