Gene Acel_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0928 
Symbol 
ID4485922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1022969 
End bp1023853 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID639729703 
Productputative ABC transporter membrane protein 
Protein accessionYP_872687 
Protein GI117928136 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.856372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTG CTGATCCCTT GCTCGCCGAT GCCGCCGCAT CGGTGCCCCG GCGGTTGCCG 
GCGGGCACGG GCAGTTTCGT TTTCTTCCGC AATGAGCTGG CGACCGTGTT TCGCCGGCGC
CGCACCATCA CCTTGCTGGT TGTCCTCGCC GCGGTGCCTT TCCTCATCGC AGTTGCCGTG
AAGCTGTCGT CCCAGCAGAT TGCGCCTGGG GAAGGACCGA CATTCCTGGA CCGCATTACG
CAGAACGGTT TGTTCGTGGG CTTGACCGCG CTGGTCGTCT GCACGCCGCT GTTTCTTCCC
CTGGCGGTGG CGGTGGTCGC CGGCGACACC GTCGCCGGCG AGGCGAACCT CGGGACGCTC
CGCTACCTTG CCATCGCGCC AGTGGGACGG TTACGGCTGA TCGTGACGAA ATTCCTCACC
GCCACCGTGT TCTGCGCCGC GGTGACCGTG GTCATCACCG GGGTCGGTGC GGTCGTGGGC
ACGCTGTTCT TTCCCGTCGG CAGGGTCACT CTGCTCTCCG GGGCGACGAT TTCCCCTGCC
GCGGCCGCAG GCCGGGAATT CCTCGTCGCC GGATACGTGA CGATTTCGCT CATCGGCCTG
GCGGCGCTGG GGCTCTTCGT CTCGACATTG ACCGACATTC CGGTAGGCGC AATGGCGGCG
GTCGCGGTCG CGGCGATTGC GTCACAGATT CTGGACAGCA TTCCGCAGGT CTCCTGGCTA
CACCCGTGGC TGTTTTCCCA CTACTGGCTG GGATTCGGCG ACCTCCTCCG CGATCCGATC
GTCTGGACGA GCCTGCTGCA CAACGCCGTC CTTCAGGCCG GCTATGTCGC GGTCTTCGGA
TCGCTTGCCT ACGGCCGATT CGCGACAAAG GACCTTCTCT CCTAG
 
Protein sequence
MSAADPLLAD AAASVPRRLP AGTGSFVFFR NELATVFRRR RTITLLVVLA AVPFLIAVAV 
KLSSQQIAPG EGPTFLDRIT QNGLFVGLTA LVVCTPLFLP LAVAVVAGDT VAGEANLGTL
RYLAIAPVGR LRLIVTKFLT ATVFCAAVTV VITGVGAVVG TLFFPVGRVT LLSGATISPA
AAAGREFLVA GYVTISLIGL AALGLFVSTL TDIPVGAMAA VAVAAIASQI LDSIPQVSWL
HPWLFSHYWL GFGDLLRDPI VWTSLLHNAV LQAGYVAVFG SLAYGRFATK DLLS