Gene Acel_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0861 
Symbol 
ID4485744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp951213 
End bp953339 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content65% 
IMG OID639729635 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_872620 
Protein GI117928069 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.186117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC GGAAATCTCA GCTGACCCGC GCCGATGCCG ATGAGGACGT CGGCAAGCAG 
CCGATTCGAA CTCGGCGAGG TGGCGTGCGC GCGAAGCGAC TCGGAGAGCT CGGCATCCCC
GCCGGGGTTA TCGCGATCAT CGTGATGATG GTCGTGCCAT TGCCCACGGC GCTGTTGGAC
GTGCTCTTGG CAACGAACAT CACGTTTGCC TTGCTGGTGC TGCTCGTGTC GATGTTCGTC
AAGCGGCCGC TTGATTTCGC CGCGTTCCCG TCCCTCCTGC TCATCGCCAC CCTGTTCCGG
CTTGCCCTCA ACATCAGCGT GACGCGACTC GTTCTGCTGC ACGGCTATGC CGGAAAGGTC
GTGCAGAGCT TTGGGCATTT CGTTGTCGGC GGCTCCCTCG TCGTCGGCCT CGTGATCTTT
TTGATCATTC TCATCATCCA GTTCGTCGTC ATCACCAACG GTGCCGGCCG GGTGGCTGAG
GTGGGCGCGC GCTTCACACT GGACGCGATG CCCGGCAAGC AGATGGCCAT TGACGCCGAC
CTCAATGCCG GACTCATCGA CGAGGCCGAG GCTCGTCGGC GGCGCAGCGA AATCGCTGCT
GAGGCCGACT TCTACGGGGC GATGGACGGA GCGTCCAAAT TCGTCAAAGG CGACGCGATC
GCGGCCGTTG TCATCACCGG CGTCAACCTT ATCGGCGGAT TGGCGATCGG AATCCTGCAG
CGGCATCTGT CGATCGGGGA AGCGGTCAAC ACCTACAGCT TGCTGAGCGT CGGGGACGGC
CTTGTCTCGC AAATTCCCGC CCTGCTCCTT TCCGTCTCCA CCGGCCTCAT CGTGACCCGC
GGTGCGAGCG AAGCGGACAT GGGCGCCGAC GTCCTGCGTC AGATCGCCTC CCAACGCCAA
GCGATCCGGA TCGGCGGAGC GGCGATCCTC GTCATTGCTC TCATTCCTGG GCTGCCGAAA
TTGCCGTTCC TCATCCTCGG TGGTGCGGCG TTGGCCCTCG GCATGCGATT GAAAGAGCCG
CCAAAACCAG CGGAACCGCA ACCTGCGGCT GAGCCTGCCG CGCCGGCACC GGATTCCCCC
GAAGCACTGG TCGAGGAAAT GCGCGTCGAA CCGCTCGAAC TCAACCTCGC CTTCGACCTC
GTCGACCTCG TCGATCAGAG CAGGGGCGGT GAACTGCTGG AACGCGTCCG CGCCCTGCGC
CGCAAACTTG CCCTTGAACT CGGCATGGTC ATTCCGATGG TGCGCACCCG CGACAACCTG
GATCTGCCGC CGGGAAGCTA CGCCATCCGA GTGAACGGCG TCGAGGTGGC CCGCGGTGAA
GCGCCGCCCG GCGCGATGCT CGCCATCGGC GAGAACCTCA CGAATTTGCC GGGCACGGCC
ACGATTGAGC CCGTTTTCGG CCTGCCGGGC AAATGGCTTG CGCCCGAACT GCGGCAGCAG
GCGGAGATGC TGGGCGCGAC GGTGGTCGAT CGCGCCTCCG TCATCACCAC CCATCTTGCC
GAGGTGGTCC GCGACAACGC CGCCAAACTG CTCTCCCGGG AGGACGTCAA GACCCTGACC
GAGTTGACCC GCCGGACGCA TCCCGTCGTC GTGGAAGAAT TGACCCCCGC CCTGCTGCAG
CTCGGCGATA TTCAGCGCGT CCTGCAAGGC CTGCTCGACG AGCACGTGCC GATCCGCGAT
CTGCCGAGAA TCTTCGAGGC GCTCTCCCAG CGGGCTCGGG TCAGTCAAGA CCCCGAAGGG
CTCATCGAGG CGGCCCGCGC CACCCTTGGA CCGGCGATTT CCGCCGCGTA CGCGCAAGAC
GGCCGCCTCT CCGTCCTGAC GATCGACCCT CTGACGGAGC AGCGTCTTGT CGACAAGCTG
CGGCACGGAG AGCACGGCAG TTTCCTTGCA CTGGACCCCG ATGATGCCGA ATACCTCGTT
GGAGAGGTTC GCCGCCTCGC CGAACGCGCC GAACAGCTCG GCAACACGCC CGTGCTGGCG
TGTGCCGCAC CGCTGCGTCC TGCGCTCCGG CGGTTGGTGC GGTCGGCGAA TCCACGGTTG
CCGGTGCTCG CGTACGGCGA GCTCGGTCCG CACCTGCAAC TGGAGACGGT AGGGACGGTG
AGCCTGGCCC ATGCGCATGC TGCTTGA
 
Protein sequence
MAPRKSQLTR ADADEDVGKQ PIRTRRGGVR AKRLGELGIP AGVIAIIVMM VVPLPTALLD 
VLLATNITFA LLVLLVSMFV KRPLDFAAFP SLLLIATLFR LALNISVTRL VLLHGYAGKV
VQSFGHFVVG GSLVVGLVIF LIILIIQFVV ITNGAGRVAE VGARFTLDAM PGKQMAIDAD
LNAGLIDEAE ARRRRSEIAA EADFYGAMDG ASKFVKGDAI AAVVITGVNL IGGLAIGILQ
RHLSIGEAVN TYSLLSVGDG LVSQIPALLL SVSTGLIVTR GASEADMGAD VLRQIASQRQ
AIRIGGAAIL VIALIPGLPK LPFLILGGAA LALGMRLKEP PKPAEPQPAA EPAAPAPDSP
EALVEEMRVE PLELNLAFDL VDLVDQSRGG ELLERVRALR RKLALELGMV IPMVRTRDNL
DLPPGSYAIR VNGVEVARGE APPGAMLAIG ENLTNLPGTA TIEPVFGLPG KWLAPELRQQ
AEMLGATVVD RASVITTHLA EVVRDNAAKL LSREDVKTLT ELTRRTHPVV VEELTPALLQ
LGDIQRVLQG LLDEHVPIRD LPRIFEALSQ RARVSQDPEG LIEAARATLG PAISAAYAQD
GRLSVLTIDP LTEQRLVDKL RHGEHGSFLA LDPDDAEYLV GEVRRLAERA EQLGNTPVLA
CAAPLRPALR RLVRSANPRL PVLAYGELGP HLQLETVGTV SLAHAHAA