Gene Acel_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0821 
Symbol 
ID4486309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp913514 
End bp916267 
Gene Length2754 bp 
Protein Length917 aa 
Translation table11 
GC content68% 
IMG OID639729594 
ProductSMC domain-containing protein 
Protein accessionYP_872580 
Protein GI117928029 
COG category[L] Replication, recombination and repair 
COG ID[COG0419] ATPase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0839342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTCG ACTCCGCTAC CGTCCGCCGC TATCGGCTGC ACCGGGACCT CACGGTCGAA 
TTCGACCCGT CGCGCACGCT GATTACCGGA GATAACGAGA CCGGCAAGAG CACGCTGGTC
GAGGCGATTC ACCGCGCCCT CTTCCTCAAG GCCACTGTCA CCGGCAGCGT CCTCGCGGAG
ATGCGGTCTC ACCTGTACGG CAGCTATCCG GAGGTGGAAC TCCGGTTCAC CGTCGGCGGT
GACACGTACC AGCTGCGCAA ACGCTTCGCC GGCCAGCAAG GCACCGCAAC CTTGAGCCAG
GTCGGCGGCC GAACCTGGCA CGGCGAAGAA GCCGAGGAAC GGCTTGCCGA GCTGCTCGGC
GTCGAACCCA CCGGCGGCGG CCGGGGCATC GATAAACGGC TCAACGCCCA GTGGGCGCAT
CTGTGGGTCT GGCAGGGACA AGGCGGCGAG GATCCCGCCC AATACACGGC CGCCCACAAC
CAGCAACTCC TTCAGCAGCT GCAGCGCGTC GGCGGTGCGG TGGCCATGCA ATCTGCCCTG
GACGGCCGGG TCGCTGAGCA TTTCGCGCAG CTGTACGACC GCCTGTTCAC CCAGACCGGA
AAGGAAAGAG CCGGGTCAGA CCTGGCCGCC GCCAAAACCG CTTATGAGCA GGCCCGGGAG
CGGTTCGAGC AGGCGGCGCT GCGCCTTGAG CGCGTCGAAA CCGCGATGAG TGACTTCGAG
CACGCCGAGG AAACCATCCG CGAGGCCGCC GCCAGCCGGG AGGACGCCCA GCGGCAACTC
CAGGCGGTCA ACGAAAAATT GGAGAAACTC ACCAGACTGC GCGACCAGGA GCAGGCGCAG
GCCCGTGAAT TGGCCGAAAT CCAGGGCCGG TTGGCGGCCG TTGAAGAGAC CGACCGGAAA
ATCCGGGAGT ACCAGGACCA GGCCCGAAAG CTGCAGGACG ACGCCGTCCC CTTGCACGCC
AAGCTGGCGG ACGCCGACCA GCGCTTGCGC GATGTACGGG ACCAGGTAGG CCGCGCGCAG
AAAATCCGTG ACGAGGCGGC GGAAAAAGCC CGGCAGGCCC GCAGAATCCG GGATTTGGCC
GTTGCGTATG AACGGATGCT GGACGCCGAG CAGCAGCATC AGGCTCTCGC CCTGCGGGTG
GCGGAGATCG AACGCCACGA GCAGACCATC CGGGAACGCG GCAGCCGGCT TGCCCAGCTC
CCGGCCATTG ACCGAAACGA CCTGGAGGAG CTTCAGGAGC GCGATCGCGA GCGCGGCGAG
GCCGACGCCC GTCTGACCGC AGCTGCGCCG GAAATTGAAC TGCTCGAATC CTCCCTGCCC
GTGCGGCTCG GCGACCGGGC GCTGTCGCCC GGGGAGCCGG TGAGAGTTCT AGAAACCACC
GAATTGACAG CCGGCGACCT GCGGGTGCGC ATTCACCCCG GCCGTGGGGA GAATCTCGCG
TCCCTTCGGG CCCGGATCGC AGAACTCGGT CGCGAGATCC AGGAAAAGCT GGACCGATGG
GGGCTGCCGG GGATCGCCGA AGCCGCTGCG GTTGTCGTGC AACGGCAAGA GATTCAGCAG
GAGATCGACC GGCTGCAGGC GGCGCGTGAG GCGCTGAATC CGGAATCGAC CCGGGCGCAA
TTCCAGGAGG CCGAGCAGCG CCTGATCGCC GCCCGGGCCG AACGGGACCG GCTGCAGCCA
ACCGTGGGCG ACGGGTACGC CGTCCCGGGA AACCTTGAGG CCGCCCGGCA CCAGGTTGAC
GAGGCACAAC AGCGCGTGGA TGAGGCCGAA GCCGGCGAGC AGCACGCCGC CGGCGTCCTG
GAGACCCTGA CCGCGGAGTT GGCGCAACTC ACCGCGGATC GGGAGAGCGT CGAGCAATCG
CTCCGGGAGC TCCAACGCCA ACAACACGAA GCGGACGCCG CAATTCGCGT CCTCGTCGAA
CAAGCCGGCG ACGAGACCCA GCGCCGCAGC CACCTCCAGG AATTGCACGA GGCGGTTCAG
ACCCTGGAAA AACGCCTCGA AGAAACCCGT GCTGCGATCG CCGAATTACA ACCCGACCTT
CTCGACGCGG ATCGGGAACG CCTCGAGCGT GTCCTCCACA ACGCCCAGGA AAGCATCCGG
CTGTCGGAAC AGCGGCGGGC CGCAGCCCAC GCGCTCCTGC AGACCGACGG CAGCACGGAT
CCCCGCGCCG AATACGCCCA CGCCCGGGCG CAGCTGGCTG AGGCCGATGA GCGGCGGAAG
GCCGCGGAGC GTTACGCAGC CGCCGTCCGG CTGGTGCACG AACTCTTCGC CGCTCAGCAA
AAACAGCTTG CCGAGCATTT CTCGCGGCCG CTGGCTGAAA AAATCACCAC CTACCTTCAG
CCCGTGTTCG GACCCCGCGT GCAGGCGGTG GCGAAATTCG ACGGCAACGA TTTCAAAGGC
GTCGAGCTGG TTCGCCCGGC CCTGGACGCC GCGCTGCCGT TCGACGCGCT CAGCGGCGGG
ACACGCGAAC AGGTGGCCGC CGCGGTACGC CTGGCGATCG CCGAACTGCT GGCGGCCGAC
CATGACGGCA CGTTGCCCGT CGTCTTCGAC GATGCCTTCG CCAATTCCGA CCCGCACCGC
ATCGCGCTGC TGCAGCGCAC CCTCGACCTC GGCGCCCGCC GCGGCCTCCA GATCATCGTT
CTGACCTGCC ACGGCACCTC CTATTCCGCG CTGGGGGCCC GGCACATCGA GCTCGAATCA
CCGAGAGCAC CTGCGGATTC CCGCCCGGTG TCGGTGACCG ATCCTGCGCA GTAG
 
Protein sequence
MRLDSATVRR YRLHRDLTVE FDPSRTLITG DNETGKSTLV EAIHRALFLK ATVTGSVLAE 
MRSHLYGSYP EVELRFTVGG DTYQLRKRFA GQQGTATLSQ VGGRTWHGEE AEERLAELLG
VEPTGGGRGI DKRLNAQWAH LWVWQGQGGE DPAQYTAAHN QQLLQQLQRV GGAVAMQSAL
DGRVAEHFAQ LYDRLFTQTG KERAGSDLAA AKTAYEQARE RFEQAALRLE RVETAMSDFE
HAEETIREAA ASREDAQRQL QAVNEKLEKL TRLRDQEQAQ ARELAEIQGR LAAVEETDRK
IREYQDQARK LQDDAVPLHA KLADADQRLR DVRDQVGRAQ KIRDEAAEKA RQARRIRDLA
VAYERMLDAE QQHQALALRV AEIERHEQTI RERGSRLAQL PAIDRNDLEE LQERDRERGE
ADARLTAAAP EIELLESSLP VRLGDRALSP GEPVRVLETT ELTAGDLRVR IHPGRGENLA
SLRARIAELG REIQEKLDRW GLPGIAEAAA VVVQRQEIQQ EIDRLQAARE ALNPESTRAQ
FQEAEQRLIA ARAERDRLQP TVGDGYAVPG NLEAARHQVD EAQQRVDEAE AGEQHAAGVL
ETLTAELAQL TADRESVEQS LRELQRQQHE ADAAIRVLVE QAGDETQRRS HLQELHEAVQ
TLEKRLEETR AAIAELQPDL LDADRERLER VLHNAQESIR LSEQRRAAAH ALLQTDGSTD
PRAEYAHARA QLAEADERRK AAERYAAAVR LVHELFAAQQ KQLAEHFSRP LAEKITTYLQ
PVFGPRVQAV AKFDGNDFKG VELVRPALDA ALPFDALSGG TREQVAAAVR LAIAELLAAD
HDGTLPVVFD DAFANSDPHR IALLQRTLDL GARRGLQIIV LTCHGTSYSA LGARHIELES
PRAPADSRPV SVTDPAQ