Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0741 |
Symbol | valS |
ID | 4485506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 815203 |
End bp | 817869 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639729511 |
Product | valyl-tRNA synthetase |
Protein accession | YP_872500 |
Protein GI | 117927949 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0469934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCGGACG ACGCGATGCC CACGGCGGTC CGTGAACTCC CTCCGGTGTA TGCACCGGAA GGGGTCGAGC GCCGCCACTA TGAGCGCTGG GTGGCCGCCG GATACTTCAC CGCTGACGCG ACGAGTTCAC GGCCGGCGTA CTGCATCGTG CTGCCCCCAC CGAACGTCAC CGGGCAGCTG CACATGGGCC ATGCCCTCAA CCACAGCCTG ATGGACGTGC TCACCCGGCG CCGGCGGATG CAGGGGTATG AAACCCTCTG GCTCCCGGGC ATGGATCACG CGGGAATCGC CACCCAGAAC GTCGTCGAGC GGGAACTCGC CCGGGAGGGC ATCTCCCGGC ACGACCTGGG CCGGGAGAAA TTCGTCGAAC GGGTCTGGCA GTGGAAGGCC GAGTACGGCG GGAAAATCCT CGATCAGATG CGACGGCTTG GTGAAGGGGT TGACTGGACG CGTGAACGCT TCACCATGGA CGACGGCCTG TCACGCGCGG TTCAGGAGAT TTTCCGCCGC TTGTACGCGG ACGGCTTGAT TTATCGAGCG GAGCGCATCA TCAATTGGTG TCCGCGTTGC TTGACGGCCC TGTCGGACAT TGAGGTGGAG CACAGCGACG ACGAAGGCGA ACTCGTCTCC ATTTCCTATG GTCCGATCAC CGTTGCCACC ACCCGGGTCG AAACAATGCT TGGCGACACG GCGGTCGCGG TTCATCCGGA CGATGAGCGT TATGCGCACC TGGTCGGTAC GTTCGTCGAA CTTCCGTTGA CCGGCCGCCG GATTCCCATC GTGGCGGACG AGCACGTCGA CCCGAATTTC GGCACCGGCG CGGTGAAGGT GACACCCGCC CATGACCCCA ACGACTTTGA GATTGCCCAG CGGCACGGGC TGCCGGCCCT CACCATCATG GATGAACGCG GGGTCATCAC CGCGCCTGGA CCGTTCCAAG GCTTGGACCG CTTCGAGGCG CGTCCGGCGG TGACGGCGGC GCTGCGCGAA CTCGGCCTCA TCGTCGCGGA GAAACGACCA TACGTGCATG CGGTCGGGCA CTGTTCGCGC TGTGACACCG TCATCGAGCC GCGTCTGTCA CTGCAGTGGT TTGTCAAGGT GGAGTCCCTG GCGAAAGCGG CGGGGGACGC CGTCCGGGAC GGCCGGGTCG TCATTCACCC GCCGGAGATG GCCCGCATGT ACTTCGACTG GGTCGACAAC ATGCATGACT GGTGCATCAG CCGCCAGTTG TGGTGGGGGC ATCGGATTCC GGTCTGGTAC GGCCCGGGCG GCGAAATGGT CGTGGTCGGT CCGGACGAGA CTCCGCCGGC AGGCGACGGC TGGCATCAGG ACGAAGACGT GCTCGACACC TGGTTCTCCT CGGCGCTCTG GCCGTTCTCC ACCCTCGGCT GGCCGGAGGA GACCGCGGAT CTCGCGAAGT TCTATCCCAC CTCGGTGCTC GTCACCGGGT ACGACATCAT CTTCTTCTGG GTCGCGCGGA TGATGATGTT CGGCCTGTAT GCGATGAAGC ATCGAGGGCC GCGCGACGCC GTACCGTTCC GGATTGTGGC GTTGACCGGG CTGATCCGCG ACGAGCGCGG CCGGAAAATG AGCAAATCGG CCGGCAATGG TATTGACCCG ATTGATTGGA TTGACCGGTA CGGCGCCGAC GCGACGCGCT TCACCCTGCT CCGCAACGCA TCACCCGGCA CGGACGTCTC GGTGGGCGAC GAATGGGCCC AGGCGAGCCG GAATTTCGTC AACAAAATCT GGAACGCCGC GCGGTTCGCC ATGTTGAACG GCGCAACCAC CCAGGGGCCG ATTCCGGTCG ATGAGCTGAC CACCGCTGAC CGCTGGATTC TCTCCCGGCT CGGCTCCGTC GTCCGTGACG TCGACGCTTT CTTGGACGCG TTCGAATTCG CCAAAGCCTG CGACACGCTG TTCCACTTCA CGTGGGACGA ATTCTGTGAC TGGTATGTGG AGCTGTCCAA GCTTCCGTTG GAGCGGGGCG GCGCTGATGC GGCCCGTACC CGGCGCATCC TCGGCCACGT CCTCGACGTG CTGCTCCGCC TCTGGCATCC GATCATTCCG TTCGTCACCG AAGAACTTTG GACGACCCTC ACCGGCGCGG AGAGCCTGGT CCGGGCGGTC TGGCCGTCCG GAACCGTCGA CGGCCGGCCG CCGCTCGACG CGCTCGACCG CCGCGACGAT GACGCCGAGG AGCGGCTTGC GGCGTTGCAG GAGGTGGTCA CCGAAGTGCG CCGGTTCCGC GCCGAGCAGG GGCTGCGCCC GGCGCAACGG GTGCCGGCGC GCATTGACGG CCTTGACGCC GCGGGGCTCG GTGAATTCGA CGAGCAGCTT CGACGTCTCG CCCGCCTGGA CCCGGCGGAT GCGCAGTTCC GCGAAACCGC CGCCGTCGTC GTCGGCGTCC GTGGCACCGA GGTCCGCGTC GGCCTGGACC TCTCCGGGGC GATCGACCTC GACAAAGAGC GCGCCCGGCT GGAGAAAGCA CTGGAGGCCG CCCGTCGGGA AGTCGAAACC GCGCGGGCGA AATTGGACAA CACCGAGTTT CTCGCCAAGG CCCCGGAGGC GGTGGTCGCG AAGATGCGGG CCCGGCTTGC CGATGCGGAG GCCGACGTGA CCCGGCTGAC CGAACAACTC GCTGCGCTGC ACCGGATGCG AGGCTGA
|
Protein sequence | MSDDAMPTAV RELPPVYAPE GVERRHYERW VAAGYFTADA TSSRPAYCIV LPPPNVTGQL HMGHALNHSL MDVLTRRRRM QGYETLWLPG MDHAGIATQN VVERELAREG ISRHDLGREK FVERVWQWKA EYGGKILDQM RRLGEGVDWT RERFTMDDGL SRAVQEIFRR LYADGLIYRA ERIINWCPRC LTALSDIEVE HSDDEGELVS ISYGPITVAT TRVETMLGDT AVAVHPDDER YAHLVGTFVE LPLTGRRIPI VADEHVDPNF GTGAVKVTPA HDPNDFEIAQ RHGLPALTIM DERGVITAPG PFQGLDRFEA RPAVTAALRE LGLIVAEKRP YVHAVGHCSR CDTVIEPRLS LQWFVKVESL AKAAGDAVRD GRVVIHPPEM ARMYFDWVDN MHDWCISRQL WWGHRIPVWY GPGGEMVVVG PDETPPAGDG WHQDEDVLDT WFSSALWPFS TLGWPEETAD LAKFYPTSVL VTGYDIIFFW VARMMMFGLY AMKHRGPRDA VPFRIVALTG LIRDERGRKM SKSAGNGIDP IDWIDRYGAD ATRFTLLRNA SPGTDVSVGD EWAQASRNFV NKIWNAARFA MLNGATTQGP IPVDELTTAD RWILSRLGSV VRDVDAFLDA FEFAKACDTL FHFTWDEFCD WYVELSKLPL ERGGADAART RRILGHVLDV LLRLWHPIIP FVTEELWTTL TGAESLVRAV WPSGTVDGRP PLDALDRRDD DAEERLAALQ EVVTEVRRFR AEQGLRPAQR VPARIDGLDA AGLGEFDEQL RRLARLDPAD AQFRETAAVV VGVRGTEVRV GLDLSGAIDL DKERARLEKA LEAARREVET ARAKLDNTEF LAKAPEAVVA KMRARLADAE ADVTRLTEQL AALHRMRG
|
| |