Gene Acel_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0548 
Symbol 
ID4484975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp579245 
End bp580609 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content68% 
IMG OID639729315 
Productcarbamoyl-phosphate synthase L chain, ATP-binding 
Protein accessionYP_872307 
Protein GI117927756 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAT CCGTCCTGGT GGCGAACCGG GGAGAGATCG CCCGCCGGGT CATCCGGACC 
GTCCAGCGGA TGGGCTTGCG CGCCGTCGCC GTGTATTCGG AGGCCGACGC TGAATTGCCG
TTCGTCGCAG AGGCGGACGA AGCGGTCCTT CTCGGACCGC CGCCGCCGGC GGCAAGCTAC
CTCGACGTCG CGAAGGTGCT GGAGGCGGCG CGGCAATCGG GAGCCGAGGC GATACACCCC
GGATACGGAT TCCTCTCGGA GAACGCCGGT TTTGCCCAAG CGGTCCTGGA CGCCGGGCTG
GTCTGGATCG GCCCGGCGCC GGAGGCAATT GCGGCGATGG GCGACAAGGT CGCCGCGCGG
AACCGGGTCG CGGCGGCCGG CGTGCCGGTT GCGCCGGGAA CCGCCGAGCC GCTCACCGAT
GTCGAAGAGG CGGTGCGGGC CGCGGCGTCG ATCGGATACC CGCTGATGGT CAAGGCGGCG
GGCGGCGGCG GCGGCATCGG GATGAAGGTC GCTTGGGACG ACGCCGGGTT GCGATCGGCA
TTCGCCACTG CGCAATCAGC GGCGCAGCGG TTCTTCGCCA GCCCCGCCAT CCTGCTCGAG
CGGTACGTGC CGGGTGCCCG GCATGTCGAA GTCCAGATCC TGGGACTCCC GGACGGCCGG
GTGGTCGCCC TCGGTGAACG CGACTGCTCG GTGCAGCGCC GCCACCAGAA GGTCGTCGAG
GAGACGCCGT GCCCCGTCCT GCCGGAACCA GTCCGCCGCC GCATGTTCAT GGCGGCGGTT
CGCGCCGGCG AAGCCGTGGA CTATCGCGGC GCCGGCACCG TCGAATTCCT CCTCGATCCG
GCGAGTCTGC GCGACGACGA CCCCGAAGCG GGCGTGTTTT ACTTCCTGGA AATGAACACG
CGCCTGCAGG TCGAACACCC CATCACGGAA ATGGTGACCG GCATCGACCT CGTCGAACAG
CAAATTCTTG TCGCGGCAGG CAAACCGCCG TCCTTCAATC CCGACGACAT CCGCCGCCGC
GGGCACGCCA TCGAATTCCG CGTGTACGCC GAGGATCCCC AGCGTTTCTT CCCCAACCCC
GGAACCATCA CCGCCTGGGC GGAGCCGGCG GGCGAGGGTA TCCGCGTCGA TGCGGGCTAT
CGGGCCGGCA ACACGGTGAC GCAGTACTAC GACCCGTTGC TCGCCAAACT CTGTGTCCAC
GGCGTCGATC GGGCCGCCGC TCTGGATCGG GCACGCCGTG CGGTCGCGGC GTTTCGCATC
GAGGGTCCGA AGAATAACGT GCCGTTCTTC GCCGAACTAC TGGAGAACGA AGAATTCTGT
TCGGGGAAAT ACGACACAGG TCTCATCGAA CGCATGCGGT CGTAG
 
Protein sequence
MFESVLVANR GEIARRVIRT VQRMGLRAVA VYSEADAELP FVAEADEAVL LGPPPPAASY 
LDVAKVLEAA RQSGAEAIHP GYGFLSENAG FAQAVLDAGL VWIGPAPEAI AAMGDKVAAR
NRVAAAGVPV APGTAEPLTD VEEAVRAAAS IGYPLMVKAA GGGGGIGMKV AWDDAGLRSA
FATAQSAAQR FFASPAILLE RYVPGARHVE VQILGLPDGR VVALGERDCS VQRRHQKVVE
ETPCPVLPEP VRRRMFMAAV RAGEAVDYRG AGTVEFLLDP ASLRDDDPEA GVFYFLEMNT
RLQVEHPITE MVTGIDLVEQ QILVAAGKPP SFNPDDIRRR GHAIEFRVYA EDPQRFFPNP
GTITAWAEPA GEGIRVDAGY RAGNTVTQYY DPLLAKLCVH GVDRAAALDR ARRAVAAFRI
EGPKNNVPFF AELLENEEFC SGKYDTGLIE RMRS