Gene Acel_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0527 
Symbol 
ID4485110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp562208 
End bp562993 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID639729294 
Producthypothetical protein 
Protein accessionYP_872286 
Protein GI117927735 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGA GCAATGCGCG GACAGCGGAG CCCTATCCGC GAGCCGAAAA CCCCATGACA 
TCCAGTGCGC AGCTGGTCTA TCCCGATGAC CAAACCGGGT GGCTGGCGCG CACTCGCGTC
ACGCTGAGTC CGATGGCCGC ACCCTCCATC CTCGGTTTCT TCGGCCTGTT CGTGGCCGCC
GTGATGGTGG GAGCGTGGCA AGCGGGATGG TACGGAACGG ACGCCACACC CGCCGTCCTG
TGGCCGCTCG TCATGCTCTT CGGCGGGTTG GCCCAGCTCG TCGCGGGATT CGCCGCCCTG
CGCGCCCGGG ACGCCGTCGC CGTCGCGCTG CACGGCACCT GGGGAGCCTT CTGGCTCGCC
TGGGGTGTTC TGCAAATCCT GGTGGCGACC GGTGTGAATT CGGCGATCGC CATCGGCAGC
GCTGACACCG GACTCGCGTT CTGGTTCCTG GCGGTCGGCG CCGTCACCCT GCTCACCGCC
CTTGCCGCCA TCCCGTACCA CCTCGGGTTC GCCGCGGTGG CATGGACGCT CACCGCAGCC
GCCGGCCTGA GCGCGGCGGG ATTCTGGGCA GGCGATCTGA ACACCACGCG CGCCGGTGGG
GTGCTCTTCG TCATCGCCGC CGCAATTGCC TGGTTGGTGG CGGGCGCGAT GGTCTTCGAA
GGCGCAACCG GCCGGACCGT ACTGCCCAGT GGGCGGCTTG CGAAGGGGGC GAGCATTCCC
GGCCGCTCAG CCATTCAGCC GCTTGAGTTC AGCGCGGGCG AACCAGGTGT GCGGATAGGG
CAATAG
 
Protein sequence
MEASNARTAE PYPRAENPMT SSAQLVYPDD QTGWLARTRV TLSPMAAPSI LGFFGLFVAA 
VMVGAWQAGW YGTDATPAVL WPLVMLFGGL AQLVAGFAAL RARDAVAVAL HGTWGAFWLA
WGVLQILVAT GVNSAIAIGS ADTGLAFWFL AVGAVTLLTA LAAIPYHLGF AAVAWTLTAA
AGLSAAGFWA GDLNTTRAGG VLFVIAAAIA WLVAGAMVFE GATGRTVLPS GRLAKGASIP
GRSAIQPLEF SAGEPGVRIG Q