| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0461 |
|---|
| Symbol | |
|---|
| ID | 4484782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 496221 |
|---|
| End bp | 497762 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639729228 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_872221 |
|---|
| Protein GI | 117927670 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.274744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGGA TGTCGCAGCT GCGCCGGCAC ATTGCCCCGG TTGCGCTCAT TGTCGCGGTA
GCCGGATCGG TCGCCTGGGC GACGGTGAAT CGCGCGCCGG CGCAGCGATC CGCAACCGCC
GCAGCGGTCA CCGTGCCGCG GCCCTCGGAG ACCCTGATCT GCCCGGACGC CGGCGGGACG
TTTCCGCCGG GCGTCACCCG GGTGGCCTAC GCCAATGCGG GTCCGGACGA CGGCCAGCTC
GCGGTCGGTC CGCTGGACCC CGTCCACCCG CCCGTCCCCG CGGCCGTGCA GCCGGACCGC
GCCTGGGTGA TCGACGGGCC GGCGAAGACC GGTCCGCTGG TGCTCGACGT CCGCGGCTCG
CTTGTCGGCA CCCTCGCGGC CATGCAATTC GCCCGGCGGA TCATCGGCAG CGGGGCGGTG
CAGCTCGCTA CCGCGCCCTG CGAAGCCCCG GTCACCGATG CCTGGTTCAT CGGCGCGTCG
ACCCGTGCGG GCGCGCAGCT GCGGCTGGTG CTTGACAATC CGGACGACGT GCCCGCGACC
GTCGACCTTG ACCTATACAG CGATCAAGAT GTGCCGACGT CGTCCCGGGG CATCCGCGTC
CCCGGCCGCG CGCAGACCGC GCTCGCCATT GACCAGCTCC TGCCCGGCGC CAATCTTGTG
GCGGTTCATG TCACGGTGCG AAGCGGGCGG GTCGTTCCCG GGTTGTTCAC CCAGGTGATG
GCCGGCCAGA TACCGCTGGG CACCGCGTGG CTGCCGCGGG CGGACGGCCC GGCCACGACG
CTCACGGTTC CCGGATTTCT GGGCGGGGAC GGCGGCCGCA CCCTGTTTCT CACCAATCCC
GGGGACATCG ACGCCACGGT GTCGCTGCGG GTGACAAGTC CGGACGGTTC GTTCACCCCA
ACCGGCTACG ACCAGGTCAC CGTGCCGGCC GGGCAGATCA CCGCGGTCGA TCTGCGGCCT
GTGCTCCGGG GCGCCGACGC CGCGGTGACG ATCACCTCTG ATCAACCGCT CGTTGCCGGC
GGATCGGTCG CGCTGCCGCA GAGCGCGGTC AGCGCGTCAG ACTTGGCGTT TCTGGCCGCC
GTCCCACCTC TCGGCACGGA GACTGTCGTC CCAGGCGGCG AGACCCAGCC GGGACGACGC
ACGCTCCTGA TCTTCTCGGC GCCAGCCGGT GACGCGACCG TGCGGCTGAC CGTGCTCCCG
GGCGGCGGCA GCGCACCGTC CCCGGGGGCC GGGGCGGCAT CGCCGGGCGC AGGGACCGCC
TCGGGCGCAG GGACCGCCTT GGGTGGCGGC ACGACCGCCT CGAACGTGGT CACCGTGCCG
GTCCCGGCCG GGACGACGAA GGTAGTCGAT CTTGGTTCGA TCACCAAGGA CATCGCCCCC
GGTGTCGATG TCGTCGCGAC CGGAGGTCCG GTGTATGCGG CGTGGGTGCT GGAAGAGAGC
GGCCACGCCG GCGGCGGGAT CTCCGCCATG CCGCTGCGGA CGCCGGACCG GCTCCTCACC
CGCCCGCCGG TCGTCCCCGA CCTCACCGCG GGGTTGCCGT GA
|
|---|
| Protein sequence | MSRMSQLRRH IAPVALIVAV AGSVAWATVN RAPAQRSATA AAVTVPRPSE TLICPDAGGT
FPPGVTRVAY ANAGPDDGQL AVGPLDPVHP PVPAAVQPDR AWVIDGPAKT GPLVLDVRGS
LVGTLAAMQF ARRIIGSGAV QLATAPCEAP VTDAWFIGAS TRAGAQLRLV LDNPDDVPAT
VDLDLYSDQD VPTSSRGIRV PGRAQTALAI DQLLPGANLV AVHVTVRSGR VVPGLFTQVM
AGQIPLGTAW LPRADGPATT LTVPGFLGGD GGRTLFLTNP GDIDATVSLR VTSPDGSFTP
TGYDQVTVPA GQITAVDLRP VLRGADAAVT ITSDQPLVAG GSVALPQSAV SASDLAFLAA
VPPLGTETVV PGGETQPGRR TLLIFSAPAG DATVRLTVLP GGGSAPSPGA GAASPGAGTA
SGAGTALGGG TTASNVVTVP VPAGTTKVVD LGSITKDIAP GVDVVATGGP VYAAWVLEES
GHAGGGISAM PLRTPDRLLT RPPVVPDLTA GLP
|
|---|
| |