Gene Acel_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0450 
Symbol 
ID4485200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp483599 
End bp484600 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content69% 
IMG OID639729217 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_872210 
Protein GI117927659 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0947626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC CCGCACCTGC AAGGGATCGC CCGGCATCCC CGATGGACCG CACCGCGCCG 
ACCTACATCG CCGGCCACCG GGGTCTCGTC GGCTCGGCGG TCTGGCGGCA CTTCGCGGCG
TCCGGATTCA CCACGCTGAT CGGCCGGACC TCCGCCGAGC TCGACCTGCG GGATCGGGCG
GCCACCTTCG CGTTCTTCGA GGAGGTCCGC CCGCGGTACG TCGTCCTGGC TGCGGCCCGG
GTCGGCGGCA TCCTCGCCAA CGCCACCGAG CCGGTCGAAT TTCTCTCCGA CAATCTGCGG
ATTCAGGTCA ACGTGCTCGA CGCCGCCCTC GCGACCGGGG TGGAGCGGTT GCTCTTCCTC
GGGTCGAGCT GCATCTACCC CAAGCACGCG CCGCAACCCA TTCCGGAGGA GGCCCTACTC
ACCGGTCCGC TGGAGCCGAC GAACGAGGCC TACGCCATCG CGAAAATCGC CGGTGTGCTC
CAGGTGCAAG CCGCGCGGCG GGAGTACGGC GTCCGATGGA TTTCCGCGAT GCCGACCAAC
CTGTATGGCC CCGGTGACAA CTTCGACCTC CGCACCGCGC ACGTCCTCCC CGCCCTGATC
CGGCGATTCC ACGAGGCCGT CCAGAGCGGC GCGGAGGAGG TCGTGCTCTG GGGGACGGGC
ACGCCCCGGC GCGAATTCCT GCACGTCGAC GATCTCGCCC GGGCGTGCGA ACTCCTCCTG
GACTGTTACG ACGATCCGCT GCCGATCAAC GTCGGCGTCG GAGAGGACAT CTCGATCGCC
GAGCTGGCGG AACTCATCGC GGAGATCGTC GGTTATTCCG GGAAGATTCG GTTCGATCCG
AGCAAACCAG ACGGCACGCC GCGTAAGCTC CTCGACGTCC GCCGGATCAC CGCGCTAGGT
TTTCGTCCGC GGATCGGACT GGCGGAGGGT ATCCGGGCGA CCTACGCGTG GTACCGGGAG
CAGCTCGGCA ACCGGACCGA GTCGCCGCAC CAGACCGCGT GA
 
Protein sequence
MTSPAPARDR PASPMDRTAP TYIAGHRGLV GSAVWRHFAA SGFTTLIGRT SAELDLRDRA 
ATFAFFEEVR PRYVVLAAAR VGGILANATE PVEFLSDNLR IQVNVLDAAL ATGVERLLFL
GSSCIYPKHA PQPIPEEALL TGPLEPTNEA YAIAKIAGVL QVQAARREYG VRWISAMPTN
LYGPGDNFDL RTAHVLPALI RRFHEAVQSG AEEVVLWGTG TPRREFLHVD DLARACELLL
DCYDDPLPIN VGVGEDISIA ELAELIAEIV GYSGKIRFDP SKPDGTPRKL LDVRRITALG
FRPRIGLAEG IRATYAWYRE QLGNRTESPH QTA