Gene Acel_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0435 
Symbol 
ID4485670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp466137 
End bp467078 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content63% 
IMG OID639729202 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_872195 
Protein GI117927644 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.607095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCT CAACCGTCAC CCCAGGACGG CTCACCGCCC GTCCGCCTCA TGCCACGCAG 
CGCCGCCGCA CCGGCTCGAC GCTCGGTCAC CGGCGCGCCT GGGCTGGCGC TGCGATGTCT
CTCCCCGCCT TCATTCTTGT CGCCGCCGTG CTGGGCATTC CGATCGGTCA GGCGGTGTAC
TACTCGATGA CCGACTGGAA CGGGCTCACC GCCCATTGGA TTGGTCCGGC GGCCTATCGC
CGGGAATTCG CAGACCCGAC ATTCTGGCGT GTCCTGCAGA ACAACGCTCT TCTGCTTCTG
GCGGTGCCGG TAGCCCTGGC CGTCGGACTG GCCATTGCCT ACGTACTCAA TCAGCACATC
CCGGGTTGGC GGATCTTCCG TACCCTGATT TTCTTTCCGA CTGCGATCTC CTGGGTCGTC
ATCGGCATGG TGGCGTCCCG ATTCTTCGCC GGCGAAGGCA CTCTCAACGA CATTTTGCGC
AGCCTGGGCC TTGGCTTCCT GCACACCGAC CTGCTCTCCG GGACCCGGAC CGCGCTCCTC
GCCGTCGCCA TCACCTTCAT CTGGTCGATG GTCGGCACGA ATATGGTGAT TTTCCTCGCC
GGCATGGCAA CTCTCGATCC TGCACTCCAC GAGGCGGCCC GCCTCGACGG TGCCGGTGGT
TGGACGGTGT TCCGGCGGAT CGTCCTGCCT CAACTCAAGC GGTTCATCCA ATTCGCGTTC
ACCATTACCG TGATCAGCGC TTTCACCGCG CTTTTCAGCC TCATCTTCGT GATGACCGGA
GGTGGCCCGG GGTACGGTAC GACAACGCTG GAATTCTTCG TCTACCAGAC CGCCTTCTCC
AAGAGCCAAT TCGGTTTGGG TGCGATGCTC GGTGTCGTGC TCTTCGTCAT CATGGTCGTC
GTCGGGCTCA TCCAACTGCG TGTCCTGCGA ACGCGGGACT AA
 
Protein sequence
MASSTVTPGR LTARPPHATQ RRRTGSTLGH RRAWAGAAMS LPAFILVAAV LGIPIGQAVY 
YSMTDWNGLT AHWIGPAAYR REFADPTFWR VLQNNALLLL AVPVALAVGL AIAYVLNQHI
PGWRIFRTLI FFPTAISWVV IGMVASRFFA GEGTLNDILR SLGLGFLHTD LLSGTRTALL
AVAITFIWSM VGTNMVIFLA GMATLDPALH EAARLDGAGG WTVFRRIVLP QLKRFIQFAF
TITVISAFTA LFSLIFVMTG GGPGYGTTTL EFFVYQTAFS KSQFGLGAML GVVLFVIMVV
VGLIQLRVLR TRD