Gene Acel_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0420 
Symbol 
ID4485978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp441056 
End bp441862 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID639729187 
ProductABC-2 type transporter 
Protein accessionYP_872180 
Protein GI117927629 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAGG TGGCCGAGTT GTGGCGTTAC CGCGGTTTGA TCGGCAATTT CGCCAGCCGC 
GAGCTGAAAT CGAAGTACAA GCACAGTGTG CTCGGCTGGG CCTGGTCGCT GATCAATCCT
GCGGCGACGC TTGCGATCTA TACCGTGGTT TTTTCGACGA TATTCCGGGC GACGCCGCCT
CCCGCGCACA ACGGCATGAC GACCTACGTC GTCTATCTGT TCATCGGCCT GGTCGCGTGG
AACTTCTTCA GCAATGTGGT CAACGGCAGC ATGGCGGCGC TGATCGGCGC CGGCGCGTTG
CTCAAGAAGA TTTACTTTCC GCCGTACGCA CCGGTCCTCG GCACCGCGGC TTCGGCGCTG
GTGCAGACGA GCATCGAGTT CGGCGTCCTG TTGCTCGTGC TCGTCGGCGT GGAGAACGTC
TCCTGGTCGC TCTTCCTGAC GCCGCTCGTC TTGGCGCTGC TGCTCATCTT CGCCTCGGGG
ATCGGTCTCC TCTTCGCGCT GTTCAACGTC TTTTACCGGG ACATCAGCTA CTTGGTCGGC
GTGGTGTTGC AGCTCATTTT CTATGCGACA CCGGTCATTT GGGCGCCGCA GCAGCTGCTC
GGGCACGCGC ACGGCCACCT CGCGGTGCGG GTACTTGCCA TCAATCCGCT GTACCAATTC
GTCGAGGGTT TCCGCGACGT GCTCTGGACC GGAACGGTTC CGTCAGCAAG CCGGTGGGGG
TGGATGATTC TCGCCGCGGC GATCAGCATC GGTGTCGGGC TGACCGTGTT CATTCGCGGG
TCGCGTGACG TGAGCGAGGA ACTATGA
 
Protein sequence
MTQVAELWRY RGLIGNFASR ELKSKYKHSV LGWAWSLINP AATLAIYTVV FSTIFRATPP 
PAHNGMTTYV VYLFIGLVAW NFFSNVVNGS MAALIGAGAL LKKIYFPPYA PVLGTAASAL
VQTSIEFGVL LLVLVGVENV SWSLFLTPLV LALLLIFASG IGLLFALFNV FYRDISYLVG
VVLQLIFYAT PVIWAPQQLL GHAHGHLAVR VLAINPLYQF VEGFRDVLWT GTVPSASRWG
WMILAAAISI GVGLTVFIRG SRDVSEEL