Gene Acel_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0351 
Symbol 
ID4486419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp362796 
End bp363599 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID639729118 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_872111 
Protein GI117927560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0304335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACTC GACATCACGA CGAGTGGGAG GAACTCGCCG CCGCTTTCGT CCTCCACGCA 
TTGGAACCGG CGGACGAACA ACGGTTCGTC GCCCATCACG CGACCTGTTC ACGCTGCCAA
ACGCTGGTCG AGCAGTACGA ACTCACGACG GCGCATCTCG CCTCCCTTGC CGACGTTCCT
GACCTCGAGC CGCCGACCTG GTCGACTCTC CGCGCTGCCA TCCTGGGCGA GGACGCCGCT
CCGTCGCCGG TGCAGGGGGT CAGCGACGGC GAGAGGCGCA GGCGGACGGC GTCCGCGCGT
GGCCGACGTC CCTCACATTG GTGGACGACG CTGACCCAGC GTCGGGTCTC GCTTCGGACG
GCGGTTGTCG CCGCGGCGCT TTCGGTTGCC GTAGCGGTGG GTGTCACGGT CTGGCAGACC
TCGGGCGGTG GATCAGGTGC GCGATTGACC GCCGGCTGCG CGACCGAAAC GTCGTGCCGG
CTGGTCACCC TGCACGGCAA AGCCGGTGAT GTCGTGCTTG TCGTGCAGGG CGACAACGTG
TCGATTCTCT CGAGCGATTT ACCGCCTCTG GACGCACGCC ACATGTACGT GCTCTGGCAG
CAGCCGCTAA ACGCCAAGCC GCTGCCGCTG GTGGGTTATC ACCAGGCTGG CGCGGGGGTC
TGGGTCCGGC TCGCCGCGCC GTTTGACCGC ACGCAGGCCT TGATGGTGAG CGCTGAACCC
AAGGGTGCCT TGCCGGCGAC GGCGAGCAAT GTGCTCGCTG CAGCGGAGCT CTCGGTTCCG
GCCTCACCGC AATCCTCGAC CTAA
 
Protein sequence
MNTRHHDEWE ELAAAFVLHA LEPADEQRFV AHHATCSRCQ TLVEQYELTT AHLASLADVP 
DLEPPTWSTL RAAILGEDAA PSPVQGVSDG ERRRRTASAR GRRPSHWWTT LTQRRVSLRT
AVVAAALSVA VAVGVTVWQT SGGGSGARLT AGCATETSCR LVTLHGKAGD VVLVVQGDNV
SILSSDLPPL DARHMYVLWQ QPLNAKPLPL VGYHQAGAGV WVRLAAPFDR TQALMVSAEP
KGALPATASN VLAAAELSVP ASPQSST