Gene Acel_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0329 
Symbol 
ID4486115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp343218 
End bp343439 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content63% 
IMG OID639729096 
Producttranslation initiation factor 1 
Protein accessionYP_872089 
Protein GI117927538 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.208578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000347298 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCAAAGA AGGACGGGGT CATCGAGATC GAGGGCCAGG TGATCGAGCC GCTGCCCAAC 
GCGATGTTCC GGGTCGAGCT GGCCAACGGC CACAAGGTCC TCGCCCACAT CAGCGGCAAG
ATGCGGATGC ACTACATTCG CATCCTGCCG GGTGACCGGG TGGTCGTCGA GCTGAGCCCC
TATGACCTCA ATCGCGGCCG GATCGTCTAC CGCTACCGTT GA
 
Protein sequence
MAKKDGVIEI EGQVIEPLPN AMFRVELANG HKVLAHISGK MRMHYIRILP GDRVVVELSP 
YDLNRGRIVY RYR