Gene Acel_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0305 
SymbolrpsJ 
ID4486459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp329844 
End bp330152 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content64% 
IMG OID639729072 
Product30S ribosomal protein S10 
Protein accessionYP_872065 
Protein GI117927514 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00170298 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGGAC AGAAGATCCG CATCAGGCTG AAGGCCTATG ACCACGAGGT CATCGACAGC 
TCGGCCCGCA AGATTGTCGA GACGGTGACG CGTACCGGGG CGCGGGTCGC CGGTCCGGTG
CCGCTCCCGA CCGAGAAGAA CGTGTACTGC GTGATCCGCT CCCCGCACAA GGACAAGGAC
AGCCGCGAGC ATTTCGAGAT GCGCACCCAC AAGCGGCTGA TCGACATCAT CGACCCCACT
CCGCGGACGG TTGACTCGCT CATGCGGCTG GACCTCCCCG CCGGTGTCGA CATCGAGATC
AAGCTGTAA
 
Protein sequence
MAGQKIRIRL KAYDHEVIDS SARKIVETVT RTGARVAGPV PLPTEKNVYC VIRSPHKDKD 
SREHFEMRTH KRLIDIIDPT PRTVDSLMRL DLPAGVDIEI KL