| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0299 |
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| Symbol | rpoB |
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| ID | 4485602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | + |
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| Start bp | 317496 |
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| End bp | 321005 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639729066 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_872059 |
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| Protein GI | 117927508 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.289387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGATC GCGAGCCCTG GAAGGAACCT CACTTGGCCG CCTCGGGCAG TACATCGATG
ATCAACGGAC CTCTAGCTCC CCACCGCGTC TCATTCGCCA AAATCCACGA ACCGCTCGAC
CTCCCCAACC TCCTCGCCCT GCAGATCGAG TCCTTTGACT GGCTCGTCGG CAACGACGCG
TGGAAGGCGC GGGTCGAGGC GGCGCTTGCC GCCGGCCGGA CCGACGTCAA CACCTCGTCG
GGACTCGAGG AGATCTTCGA GGAGATCAGC CCGATCGAAG ACATCTCCGG CACGATGTCC
CTGTCGTTCC GCGACCACCG CTTCGAGCCG CCCAAGAACA CCCCCGACGA GTGCCGGGAG
CGCGACTTCA CCTACTCGGC GCCGCTCTTC GTGACCGCGG AATTCGTCAA CAACACGACC
GGCGAGATCA AGAGCCAGAC CGTGTTCATG GGCGATTTCC CGCTGATGAC CGAGAAGGGC
ACGTTCATCA TCAACGGCAC CGAGCGGGTC GTCGTCTCGC AGCTGGTCCG ATCCCCGGGC
GTGTACTTCG ATCGCACCGT CGACAAGACC TCCGACCGTG ACATTTACGG ATGCAAGATC
ATTCCGAGCC GGGGTGCGTG GCTCGAGCTC GAGATCGACA AGCGGGACAA TGTCGGCGTC
CGCATCGACC GGAAGCGCAA GCAGAGCGTG ACGGTCCTGC TGAAGGCGCT CGGTTGGGAC
GACGCCCGCA TCCTGGAGCG GTTCGGGGAG TTCGAGGCGA TCCGGGCCAC CCTCGAGAAG
GACCATGTGC ACACCCAGGA GGAGGCCCTC CTCGACATCT ACCGCAAGCT TCGTCCCGGC
GAACCACCGA CGTACGAGGC GGCGCAGACC CTGCTGAACA ACCTGTACTT CAACCCCAAG
CGGTACGACC TTGCGAAGGT CGGCCGATAC AAGGTCAACA AGAAGCTCGG CCTGGACCTG
CCGTACACCC AGAACACCCT CACCGAAGAA GACATCGTCG CCACCATCGA TTACCTCGTG
CGGCTGCACG CCGGGCAGAC GGAGACCACC CGGAACGGCC GGACGGTGAT CATCGAAACG
GACGACATCG ACCACTTCGG CAACCGGCGG CTGCGGACGG TCGGCGAGCT CATCCAGAAC
CAGATCCGGC TGGGGCTGGC GCGCATGGAG CGGGTGGTCC GGGAGCGGAT GACCACCCAG
GACATCGTGG CCATCACCCC CCAGACGTTG ATCAACATCA GGCCGGTGGT GGCGAGCATC
AAGGAGTTCT TCGGCACCTC CCAGCTCAGC CAGTTCATGG ACCAGACCAA CCCGCTGGCC
GGCCTCACCC ACAAGCGCCG GTTGAACGCG CTCGGCCCGG GTGGTCTGTC CCGGGAGCGC
GCGGGGTTCG AAGTCCGTGA CGTGCACCCC AGCCACTACG GCCGGATGTG CCCGATCGAG
ACACCGGAAG GTCCGAACAT CGGTCTGATC GGTTCGCTCG CAACGCACGG CCGGGTCAAC
GCGTTCGGCT TCGTCGAGAC CCCCTACCGG AAGGTGATCA ATGGCCGGGT GACCGACCAG
GTCGACTACC TCACCGCCGA CGAGGAAGAC CGGCACGTCA TCGCCCAGGC CAACGCCCCC
CTCAACGAGG ACGGCAGCTT CGCCGAGGAG CGGGTCTTGG TGCGCCGTCG CGGCGGAGAG
GTCGACTACG TCCACCCGAG CACGGTCGAC TACATGGACG TGTCGCCGCG ACAAATGGTC
TCGGTGGCGA CCGCGCTCAT CCCGTTCCTC GAGCACGACG ACGCGAACCG GGCGCTCATG
GGCTCGAACA TGCAGCGCCA GGCGGTACCG CTGCTGCGCG CCGAAGCGCC GCTCGTCGGT
ACGGGCATGG AGTTCCGCGC GGCCGTCGAT GCCGGTGACG TCGTCATCGC GAGCAAGGCC
GGCGTCGTCG AGGAAGTCTC GGCTGACGCG ATCACCATTG CGGCCGACGA CGGTACCCGG
CAGACCTACC GGCTGGCGAA GTTCCGCCGC TCCAACCAAG GGACGTGCAT CAACCAGAAG
CCGATCGTCG ACGAGGGTCA GCGGGTCGAG GCCGGACAGC CGATCGCGGA CGGCCCCTGC
ACGCAGGGCG GCGAGCTGGC GCTCGGGCGT AACCTGCTCG TCGCCTTCAT GTCCTGGGAA
GGCCACAACT ACGAAGACGC CATCATCATC TCGGAGCGTC TCGTCAAGGA GGACATCCTC
TCGTCGATCC ACATCGAAGA GCACGAGGTC GACGCCCGGG ACACCAAGCT CGGCCCGGAA
GAGATCACCC GCGACATTCC CAATGTCAGC GAGGAGATCC TCGCCGACCT GGACGAGCGC
GGCATCATCC GCATCGGCGC CGACGTCGTC CCCGGTGACA TCCTCGTCGG CAAGGTGACG
CCGAAGGGCG AGACCGAGCT CACCCCCGAA GAGCGGCTTC TCCGGGCGAT CTTCGGGGAG
AAGGCCCGTG AGGTCCGGGA CACCTCGCTC AAGGTTCCCC ACGGCGAGTC CGGCAAGGTC
ATCGATGTCA AGGTCTTCAC GCGGGACGAC GCGGAGTTGC CGCCCGGCGT CAACGAGCTC
GTCCGGGTCT ACGTCGCCCA GAAGCGGAAG ATCACCGATG GGGACAAGCT GGCCGGACGG
CACGGCAACA AGGGCGTCAT CGCGAAGATC CTCCCGGAGG AGGACATGCC GTTCCTGGAG
GACGGCACTC CGGTCGACAT CATCCTCAAC CCGCTCGGTG TGCCCGGCCG GATGAACGTC
GGTCAGGTGC TGGAGACGCA CCTCGGCTGG GCGGCCAAGT CGGGCTGGAA GGTCGAGCTC
AACGGCCAGC CCGAGGGCTG GCGGAAGCGG CTCGCCGACA TCGGCGCCCT GGACGCACCG
CCGAACACGC TCGTCGCGAC CCCCGTCTTC GACGGCGCGA AAGAGGACGA GATTCGCGGT
CTTCTGGAGA ACGCCCTGCC CAACAGCGAC GGCTTGCGGA TGGTCGGCCC GGACGGCAAG
GCGCGGCTCT TCGACGGCCG GACCGGCGAG CCCTATCCGG AGCCGATCAG CGTCGGCTAC
ATCTACATCA TGAAGCTCCA CCACCTGGTG GACGACAAGC TGCACGCCCG GTCGACCGGC
CCCTACTCGA TGATCACCCA GCAGCCGTTG GGTGGGAAAG CCCAATTCGG TGGCCAGCGG
TTCGGCGAGA TGGAGGTGTG GGCGCTCGAG GCCTATGGTG CGGCGTACGC GCTGCAGGAG
CTGCTCACGA TCAAATCCGA CGACGTTCTC GGCCGGGTCA AGGTCTACGA GGCGATCGTC
AAGGGCGAGA ACATCCCGGA GCCGGGCATC CCCGAGTCGT TCAAGGTCCT GGTCAAGGAG
ATGCAGGCGC TCTGCCTCAA CGTCGAGGTC CTCTCCAGCG ACGGGATGAC CGTCGAGATG
CGGGAGACGG ATGACGAAGT CTTCCGCGCC GCCGAAGAGC TCGGCATCGA CCTCTCGCGC
CGCGAACCCA GCAGCGTCGA GGAGATCTAA
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| Protein sequence | MVDREPWKEP HLAASGSTSM INGPLAPHRV SFAKIHEPLD LPNLLALQIE SFDWLVGNDA
WKARVEAALA AGRTDVNTSS GLEEIFEEIS PIEDISGTMS LSFRDHRFEP PKNTPDECRE
RDFTYSAPLF VTAEFVNNTT GEIKSQTVFM GDFPLMTEKG TFIINGTERV VVSQLVRSPG
VYFDRTVDKT SDRDIYGCKI IPSRGAWLEL EIDKRDNVGV RIDRKRKQSV TVLLKALGWD
DARILERFGE FEAIRATLEK DHVHTQEEAL LDIYRKLRPG EPPTYEAAQT LLNNLYFNPK
RYDLAKVGRY KVNKKLGLDL PYTQNTLTEE DIVATIDYLV RLHAGQTETT RNGRTVIIET
DDIDHFGNRR LRTVGELIQN QIRLGLARME RVVRERMTTQ DIVAITPQTL INIRPVVASI
KEFFGTSQLS QFMDQTNPLA GLTHKRRLNA LGPGGLSRER AGFEVRDVHP SHYGRMCPIE
TPEGPNIGLI GSLATHGRVN AFGFVETPYR KVINGRVTDQ VDYLTADEED RHVIAQANAP
LNEDGSFAEE RVLVRRRGGE VDYVHPSTVD YMDVSPRQMV SVATALIPFL EHDDANRALM
GSNMQRQAVP LLRAEAPLVG TGMEFRAAVD AGDVVIASKA GVVEEVSADA ITIAADDGTR
QTYRLAKFRR SNQGTCINQK PIVDEGQRVE AGQPIADGPC TQGGELALGR NLLVAFMSWE
GHNYEDAIII SERLVKEDIL SSIHIEEHEV DARDTKLGPE EITRDIPNVS EEILADLDER
GIIRIGADVV PGDILVGKVT PKGETELTPE ERLLRAIFGE KAREVRDTSL KVPHGESGKV
IDVKVFTRDD AELPPGVNEL VRVYVAQKRK ITDGDKLAGR HGNKGVIAKI LPEEDMPFLE
DGTPVDIILN PLGVPGRMNV GQVLETHLGW AAKSGWKVEL NGQPEGWRKR LADIGALDAP
PNTLVATPVF DGAKEDEIRG LLENALPNSD GLRMVGPDGK ARLFDGRTGE PYPEPISVGY
IYIMKLHHLV DDKLHARSTG PYSMITQQPL GGKAQFGGQR FGEMEVWALE AYGAAYALQE
LLTIKSDDVL GRVKVYEAIV KGENIPEPGI PESFKVLVKE MQALCLNVEV LSSDGMTVEM
RETDDEVFRA AEELGIDLSR REPSSVEEI
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