Gene Acel_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0130 
Symbol 
ID4484618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp132513 
End bp133901 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content63% 
IMG OID639728892 
Productextracellular solute-binding protein 
Protein accessionYP_871891 
Protein GI117927340 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATGA CACACAGGCG GACACGCCTG GCACTCGGGG TTGCAGCAGT CGCAGCCCTG 
GCTCTCGCCG GTTGTTCCTC CGGCAAATCG ACCAAGTCCG CAGCGTCAGG TTCGCCATCG
AGCGCGGGCT CATCCAGCCC GGCGGCGAGT GCGTCAGCCA GCGCATCCGC CAGCGGTGCT
TGGAACTGCG GTGACGGCGG TCAGAAGATC ACCCTCAAGA TCGGACTCTT CGGAAACTTC
GCGTACAAGA CGGCAGGTCT GTACGACCAG TACCAGAAGC TCTGCCCGAA CATCACGATT
CAGGAAGACG ACATCGAGCA GAGCTCTGAC TACTGGAACA AACTCAAGAC CAACCTCGCC
GCCGGCTCTG GTCTGGACGA CATCCAGGCG ATTGAGGTCG GTTTCGTCGC CCAGGTGACG
GCGAACTACG CCGACAAGTT CGTCGACTTC AACACTGTTC CGAATGCCGA CAAGATCAAG
TCGACGTTCT TCCCCTGGAA GTGGCAGATG GCGACCTCAA CGGACGGCAA GACCGTCGGT
CTGGGTACCG ACGCTGGTCC GGAGGCGATG TGCTACCGCC ACGACCTGCT TCAGCAGGCT
GGTATGGACG CCGACCGCGA CAAGCTCGCT CAGGACTGGG CGACCTGGGA CGACTTCATC
AAGTTCGGTG AGCAGTACAA GCAGAAGACC GGTAAGGCGT TTATCGACTC CACCGGCAGC
ATCTTTAACG CCGCGGTGTA CCAGAGCTCC GAGGCCTACG ACAACGCGCA AGGCCAGCCG
GACGTGGCGA ACTCCCCGGG TGTGAAGGCC GCGTGGGACC TCGCTGTGAA GGCGGCTCAG
GCGGGAATCA CTGCAAAGAT CAACCAGTGG ACGCCGGAGT GGAACCAGTC GTTCGCCAGC
GGCCGGTTCG CGACCATCTC CTGCCCGGCG TGGATGCTCG CCTACATCAC CTCCCAGGCC
GGTGACGCCG GTAAGGGCAA GTGGGACGTG ACGTCGCTGC CCGGCGGTTC GGCCAACTGG
GGTGGTTCGT GGCTCGGTGT GCCGAAGGGT GGCCCGCACG AGCAGGCCGC GATCGCCCTC
GCCGAGTGGC TGACTGCGCC GCAGCAGCAG CTCACCATGT GGAACTCGCA GGGCTTCTGG
CCGTCCTCGC AGGTCGCGGC GCAGGACCCG TCGGTGCAGA ACAAGACCAA CGAGTACTTC
AACAACGCGC CGATCGGCCA AATCTTCGGC AAGGCTGCGT CTGAGCTGAA GATGCCGCCC
ATCGGTCCAT ACGACACCGA CATTCAGAGC GCCCTCGACA CCGAGCTCGG CAACATCGAC
CAGAACCACA AGGATCCGAC GAAGGCGTGG AACGACGCCC TTGCGAAGAT CAAGCAGATT
ACGGGCTGA
 
Protein sequence
MFMTHRRTRL ALGVAAVAAL ALAGCSSGKS TKSAASGSPS SAGSSSPAAS ASASASASGA 
WNCGDGGQKI TLKIGLFGNF AYKTAGLYDQ YQKLCPNITI QEDDIEQSSD YWNKLKTNLA
AGSGLDDIQA IEVGFVAQVT ANYADKFVDF NTVPNADKIK STFFPWKWQM ATSTDGKTVG
LGTDAGPEAM CYRHDLLQQA GMDADRDKLA QDWATWDDFI KFGEQYKQKT GKAFIDSTGS
IFNAAVYQSS EAYDNAQGQP DVANSPGVKA AWDLAVKAAQ AGITAKINQW TPEWNQSFAS
GRFATISCPA WMLAYITSQA GDAGKGKWDV TSLPGGSANW GGSWLGVPKG GPHEQAAIAL
AEWLTAPQQQ LTMWNSQGFW PSSQVAAQDP SVQNKTNEYF NNAPIGQIFG KAASELKMPP
IGPYDTDIQS ALDTELGNID QNHKDPTKAW NDALAKIKQI TG