Gene Aboo_1501 details

Gene Information

• Locus tag: Aboo_1501
• ID: 8828470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 1446135
• End bp: 1446788
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 43%
• Product: ribosomal protein S5
• Protein accession: YP_003483869
• Protein GI: 289597173

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000000598277
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTGGG AGCCAAAAAC AAGGCTTGGG AAACTCGTTT ATGAGGGAAA GATTACCAAC 
ATGTCCCAAG CATTGAGAAG CAATTTACCT CTGAGGGAGC CAGAGATAGT TGATGTTCTG 
CTTCCAAATC TTAAGGAAGA GGTAATTGAT GTTAGAATGG TTCAGCGTAT GACAGATAGC 
GGTAGAAGAA CAAAATTCTC AGTTATGGTT GCTGTAGGTA ATGGAGATGG ATTTGTTGGT 
ATAGGAAAGG CAAAAGCTAA GGAAGTTGGA GCTGCCATAA GAAAGGCAAT TGAAGTTGCG 
AAGCTAAATA TTATTGAAAT AAAGCGTGGT TGTGGCTCTT GGGAATGCGG ATGCGGTATG 
CCCCACTCTT TACCCTTCAA AGTTACTGGC AAATGTGGCT CTGTTAGGGT TACTTTAAAG 
CCTGCACCAA AGGGTGTTGG ACTGGCAGTG GGGGATGTGG CAAAAACGAT ACTACAGCTT 
GCAGGAGTTA AAGATGTTTG GGGCTTTACG CAGGGACATA CGAAGACCAC CGTGAATTAT 
GCTGTTGCAA CTTATGATGC CTTAAAGCAA ACCACAATAG TTAGGGTTAA TCCCCGTTTA 
ATTATGCCAA TTTACAAAGG AGGTGTAGAG AATGTTAGCA GTGATCAGAG TTAG 

 

Protein sequence

MDWEPKTRLG KLVYEGKITN MSQALRSNLP LREPEIVDVL LPNLKEEVID VRMVQRMTDS 
GRRTKFSVMV AVGNGDGFVG IGKAKAKEVG AAIRKAIEVA KLNIIEIKRG CGSWECGCGM 
PHSLPFKVTG KCGSVRVTLK PAPKGVGLAV GDVAKTILQL AGVKDVWGFT QGHTKTTVNY 
AVATYDALKQ TTIVRVNPRL IMPIYKGGVE NVSSDQS