| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1461 |
|---|
| Symbol | |
|---|
| ID | 8828426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1396930 |
|---|
| End bp | 1398192 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | hydroxymethylglutaryl-CoA reductase, degradative |
|---|
| Protein accession | YP_003483829 |
|---|
| Protein GI | 289597133 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.478544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTT CGCGTATATC TGGATTTTAT AAATTATCCA TAGAAGAGAG ATTGAAAATA
GTCAAGGAAT TTTCAGAATT GAGTGACGAA GAGGCAGAGT TCCTTTTGAA AGGACATTTG
GATATGGATC TTGCAGATAG GATGATTGAA AATGTGGTGG GTATGACTGA ACTGCCAATA
GGAATTGCCA CAAATTTCAA AATAAATGGG AAGGATTATT TAATTCCAAT GGCAATAGAA
GAGCCGAGTG TGGTTGCGGC AGCGAGTCAT GCTGCAAAAT TAGCCCGTGA AGGGGGAGGG
TTTTTCACAT CTTCCACAGA GCCAATAATG ATCTCTCAAA TTCAAGTTGT TGGGCTTCGA
AATCCTCATT TTGCTAAGAT GCAGGTATTG GAGCATAAAG AGGAATTAAT GAGAATAGCG
AACGAGCAGG ACCCTGTGTT GATAAAGGTA GGTGGAGGAT GTAGAGATAT AAAGGCCAGG
GTTATAGATA GTAATATGGG ACCAATGCTG GTTATACATT TGCATGTCGA TGTTCGCGAT
GCCATGGGTG CAAACGCAGT GAATAGTATG GCAGAGGCAT TGGCGCCCTA CATAGAGGAT
ATTACAGGGG GCAAAGTTTA TCTTCGTATA TTAAGCAACT TGGCAATATA TCGTCTTGCT
AGAGCGCGTG CCGTATGGAA AAAAGATGTG ATAGGCGAGG ATACCGTTAA AGGTATACTC
TACGCCTACG AGTTTGCGCG GGTAGATCCA TTCAGGGCAG CAACACATAA CAAGGGTATA
ATGAACGGTA TAGATGCAGT TTTAATAGCC ACAAGCAATG ATTGGCGGGC TGTGGAAGCA
GGAGCACATG CATTTGCCGC AATGGATGGC TGGTACACTT CTCTAACTCA TTATGAGGAG
GATGAAGAGG GCAATTTGGT AGGGAGTATA GAATTGCCAA TGGCAGTTGG AATAATAGGA
GGTGCAACAA GTACACATCC CAAGGCGAAG ATTGCTAGGA AGATTCTAGG TATAAAAACT
GCAAAAGAAT TTGGAGAGAT TTTAGCAGCA GTTGGGTTAG CTCAGAACTT TGCCGCTTTG
AGAGCCCTTG CTACCGAGGG GATACAGAGA GGTCATATGA GCTTGCATGC AAGGAATATA
GCAGTTATGG CTGGAGCCAA GGGAGAGGAA ATAGATAGAG TTGCAGAGTT ATTGGTTAAA
GAGAAGAAAG TAAGAGTAGA TCGCGCCAAG GAAATACTTG AAGAGCTAAG GGAAAGAAAA
TGA
|
|---|
| Protein sequence | MKSSRISGFY KLSIEERLKI VKEFSELSDE EAEFLLKGHL DMDLADRMIE NVVGMTELPI
GIATNFKING KDYLIPMAIE EPSVVAAASH AAKLAREGGG FFTSSTEPIM ISQIQVVGLR
NPHFAKMQVL EHKEELMRIA NEQDPVLIKV GGGCRDIKAR VIDSNMGPML VIHLHVDVRD
AMGANAVNSM AEALAPYIED ITGGKVYLRI LSNLAIYRLA RARAVWKKDV IGEDTVKGIL
YAYEFARVDP FRAATHNKGI MNGIDAVLIA TSNDWRAVEA GAHAFAAMDG WYTSLTHYEE
DEEGNLVGSI ELPMAVGIIG GATSTHPKAK IARKILGIKT AKEFGEILAA VGLAQNFAAL
RALATEGIQR GHMSLHARNI AVMAGAKGEE IDRVAELLVK EKKVRVDRAK EILEELRERK
|
|---|
| |