Gene Aboo_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1366 
Symbol 
ID8828328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1308966 
End bp1310081 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content41% 
IMG OID 
Productsodium ion-translocating decarboxylase, beta subunit 
Protein accessionYP_003483736 
Protein GI289597040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0970763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTGT TAGGCATACT TGGAGAATTG GTTGGATTCC TTGCCCTAAG TTGGAAAGAA 
GTAGTGATGA TTATAATTGG CGGAATATTC ATAGTGCTTG GAATAAAATA CAAAATGGAA
CCTTTGCTAC TTATACCCAT CGGATTTAGC GCCATAATCG TTAATCTTCC ATTGAGTGGG
ATTACAGAAG CCCCTCATGG ATTTCTTTAT TTAGTTTATA AATATTTAAT AAGCACTGAG
GCAATTCCCC TTCTTATATT TCTCGGAATT GGTGCAATGA CAGATTTTGA GCCTCTGCTT
GCAGATCCCA AAACTTTCCT GCTTGGAGCT GCAGCTCAGA TTGGCATATA CTTTGCCATG
CTTGCGGCCC TTATAATGGG ATTCAACATA AATCAGGCTG CAGCTATTGG AATCATAGGA
GGGGCTGATG GGCCTACAAC AATTTATACA GCCACAAAGC TCGCCCCTAG CATACTGGGT
GCAGTAGCAG TGGCTGCCTA TTCCTATATG TCTCTTGTGC CAATAATCCA ACCTCCCGTA
ATTAAAGCAC TTACAACTAA AAAAGAAAGA AATGTAATTA TGGAACCTTT ACGCAAAGTT
TCCAAAAAAG AGAAGATTCT GTTTCCCATA GTGACCACCA TTGTTGTAGG ACTTCTCGTA
CCTACTGCCC TTCCCCTAGT AGGAATGTTA ATGTTTGGGA ATCTTTTGAG AGAGTGCGGA
GTTACAGAGA GATTATCTAA AACTGTGCAG AATGAGTTAA TAAACATAGC CACTATATTT
TTAGGTTTGG GTGTTGGATA TATGATGACT GCGGAGAGAT TTTTAAACCT CCAAACTGTA
GAAATCCTCT TGCTAGGAGT GTTTGCTTTT GCCACAGCCA CTGCAGGAGG CGTATTACTT
GGAAAACTTT TCTATGTATT ATCTCATGGA AAAATAAACC CAATGATTGG CGCAGCGGGT
GTAAGTGCAG TACCAATGAG TGCCAGAGTT GTTCAAAAAA TGGGAGTTAA AGAAAATCCC
CGCAATTTCC TACTGATGCA TGCCATGGGC CCAAATGTTG CAGGTGTTAT AGGTTCAGCA
ATAGCTGCGG GAGTTTTTAT TGCTTATTTA CTTTAA
 
Protein sequence
MRVLGILGEL VGFLALSWKE VVMIIIGGIF IVLGIKYKME PLLLIPIGFS AIIVNLPLSG 
ITEAPHGFLY LVYKYLISTE AIPLLIFLGI GAMTDFEPLL ADPKTFLLGA AAQIGIYFAM
LAALIMGFNI NQAAAIGIIG GADGPTTIYT ATKLAPSILG AVAVAAYSYM SLVPIIQPPV
IKALTTKKER NVIMEPLRKV SKKEKILFPI VTTIVVGLLV PTALPLVGML MFGNLLRECG
VTERLSKTVQ NELINIATIF LGLGVGYMMT AERFLNLQTV EILLLGVFAF ATATAGGVLL
GKLFYVLSHG KINPMIGAAG VSAVPMSARV VQKMGVKENP RNFLLMHAMG PNVAGVIGSA
IAAGVFIAYL L