Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1366 |
Symbol | |
ID | 8828328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | + |
Start bp | 1308966 |
End bp | 1310081 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | sodium ion-translocating decarboxylase, beta subunit |
Protein accession | YP_003483736 |
Protein GI | 289597040 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0970763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGGTGT TAGGCATACT TGGAGAATTG GTTGGATTCC TTGCCCTAAG TTGGAAAGAA GTAGTGATGA TTATAATTGG CGGAATATTC ATAGTGCTTG GAATAAAATA CAAAATGGAA CCTTTGCTAC TTATACCCAT CGGATTTAGC GCCATAATCG TTAATCTTCC ATTGAGTGGG ATTACAGAAG CCCCTCATGG ATTTCTTTAT TTAGTTTATA AATATTTAAT AAGCACTGAG GCAATTCCCC TTCTTATATT TCTCGGAATT GGTGCAATGA CAGATTTTGA GCCTCTGCTT GCAGATCCCA AAACTTTCCT GCTTGGAGCT GCAGCTCAGA TTGGCATATA CTTTGCCATG CTTGCGGCCC TTATAATGGG ATTCAACATA AATCAGGCTG CAGCTATTGG AATCATAGGA GGGGCTGATG GGCCTACAAC AATTTATACA GCCACAAAGC TCGCCCCTAG CATACTGGGT GCAGTAGCAG TGGCTGCCTA TTCCTATATG TCTCTTGTGC CAATAATCCA ACCTCCCGTA ATTAAAGCAC TTACAACTAA AAAAGAAAGA AATGTAATTA TGGAACCTTT ACGCAAAGTT TCCAAAAAAG AGAAGATTCT GTTTCCCATA GTGACCACCA TTGTTGTAGG ACTTCTCGTA CCTACTGCCC TTCCCCTAGT AGGAATGTTA ATGTTTGGGA ATCTTTTGAG AGAGTGCGGA GTTACAGAGA GATTATCTAA AACTGTGCAG AATGAGTTAA TAAACATAGC CACTATATTT TTAGGTTTGG GTGTTGGATA TATGATGACT GCGGAGAGAT TTTTAAACCT CCAAACTGTA GAAATCCTCT TGCTAGGAGT GTTTGCTTTT GCCACAGCCA CTGCAGGAGG CGTATTACTT GGAAAACTTT TCTATGTATT ATCTCATGGA AAAATAAACC CAATGATTGG CGCAGCGGGT GTAAGTGCAG TACCAATGAG TGCCAGAGTT GTTCAAAAAA TGGGAGTTAA AGAAAATCCC CGCAATTTCC TACTGATGCA TGCCATGGGC CCAAATGTTG CAGGTGTTAT AGGTTCAGCA ATAGCTGCGG GAGTTTTTAT TGCTTATTTA CTTTAA
|
Protein sequence | MRVLGILGEL VGFLALSWKE VVMIIIGGIF IVLGIKYKME PLLLIPIGFS AIIVNLPLSG ITEAPHGFLY LVYKYLISTE AIPLLIFLGI GAMTDFEPLL ADPKTFLLGA AAQIGIYFAM LAALIMGFNI NQAAAIGIIG GADGPTTIYT ATKLAPSILG AVAVAAYSYM SLVPIIQPPV IKALTTKKER NVIMEPLRKV SKKEKILFPI VTTIVVGLLV PTALPLVGML MFGNLLRECG VTERLSKTVQ NELINIATIF LGLGVGYMMT AERFLNLQTV EILLLGVFAF ATATAGGVLL GKLFYVLSHG KINPMIGAAG VSAVPMSARV VQKMGVKENP RNFLLMHAMG PNVAGVIGSA IAAGVFIAYL L
|
| |