Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1358 |
Symbol | |
ID | 8828320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | + |
Start bp | 1301846 |
End bp | 1302667 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003483728 |
Protein GI | 289597032 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000000906446 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTT ACCCAATTGC ATCGGACTCC TTAGGAGTTC GCTCCCTCTC TGTTTTTATT GAATCCCGTG TCAATGTTTT CATAGACCCT TCTGCCGCTC TCGGTCCTTA CCGTTATGGT TTACCCCCTA AACCGCCAGA GATTCAAGCA CTACAAAAAT ATAAAAAGGA GATCAGAGAA TTAGCCAACA AGGCAGATAT TTTTGTTATT TCCCATTATC ATTATGACCA TTATGATCCA GATGAGGATT TTTATGAAGG AAAGGTAGTT TATGCAAAGC ATTGGAAAGA TAAAATAAAT TACAGCCAGA AAAAGAGGGC CTATGCATTC CACGAAAAAT TTGCAGATAA ATGCGAGTTG CATTATGTGG ATGGAAAGAA GTACGAAATT GAAGGTGTTA AAATAAAATT CTCTAAGCCA TTTCCCCATG GTAATGAACG AACCCGTTTA GGATTTGTTA TAATGACTAC AGTAGATGAT GGAAAAACAC GAGTTTTACA TGCCTCAGAT GTTGAAGGAC CCATCGTAGA AGAGGCCGCA GAGTATATAA TAACGGAAAA CCCAGATATC GCAATAATTG ACGGACCTGC CACATACTTT CTCGGCTACA GATTCTCTCA GGAAGATTTA AAAAGGAGTA TAAAAAATCT TGTTAAAATT GCAGAAAATG TTCCCAAAGT AATTTTAGAT CACCATCTTT TAAGAGATTT GAAATATAGA GATAGACTGG AGGAAGTGTA CGAGCTTGAT AATATACTCA CATTTGCAGA ATTCAACAAA GAGCCTATAA ATATGTTGGA GGCACATAGG AAAGATTTGT AA
|
Protein sequence | MKIYPIASDS LGVRSLSVFI ESRVNVFIDP SAALGPYRYG LPPKPPEIQA LQKYKKEIRE LANKADIFVI SHYHYDHYDP DEDFYEGKVV YAKHWKDKIN YSQKKRAYAF HEKFADKCEL HYVDGKKYEI EGVKIKFSKP FPHGNERTRL GFVIMTTVDD GKTRVLHASD VEGPIVEEAA EYIITENPDI AIIDGPATYF LGYRFSQEDL KRSIKNLVKI AENVPKVILD HHLLRDLKYR DRLEEVYELD NILTFAEFNK EPINMLEAHR KDL
|
| |