Gene Aboo_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1335 
Symbol 
ID8828297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1279638 
End bp1280393 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content36% 
IMG OID 
ProductNERD domain protein 
Protein accessionYP_003483705 
Protein GI289597009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.600147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATG TTTATGGGCT TTCAATGGGT AAGAGTTATC CCGAAGAGCA GTTACGAAGG 
CTAAGAAAAA AGAGAAGAAT GAATATATTA AAATCAGCTA TTTTATTCAC ATTTGCGATG
CTTGGAGAAA TATTTATTCT AAATCATTTT TCAGGAGGAT TAAAGATCGG ATTCAATATA
CCTTTTCTTG CAGTTCTCCT TCTCCTTCTT CTTGCCCTGA TATTTTTTGC CTTAATGCTT
CATTATTTTA AACCTTCCAA GGATGAAAGA AAATTCAGTA TGGGAGTAGA GGGTGAGAAA
TTATTCAGGA AATATCTGGA TAAGCTCAGG GGTTATAAAT TCTACAGCTT GCCTTTACCC
CATGGTGGTG ATATTGATGC TCTTCTTATT AGTAATAAAG GTATTTTTGC ATTTGAGGTT
AAAAATTATT CGGGCATAGT TGAGTGCGAA GGAGATGAAT GGAAAAGAAT TAAAATTGGA
AAAGGGGGAG GTAAATACGA AGGGCATGTT GGCAAACCCT CCGAGGAGGC AAAGAGACAT
GCCCTTGATT TGCAGAATTA TCTAAATACG AAAGGGTTTG ATGTTATAGT ATACCCCGTA
GTCGTTATCA CGCATTCTGA ATCTATACTT CGGTGTGAGA GATGCTCGGT TAGAGTTATC
AAACCTCAAG AGTTAAGGAT ATTGCTCAAC AAGAAAAATG AGCTTACGGA TAAGGAGTGT
AAAAATATAT ACAAAGAGAT TAGCAAATTA ATTTAG
 
Protein sequence
MNNVYGLSMG KSYPEEQLRR LRKKRRMNIL KSAILFTFAM LGEIFILNHF SGGLKIGFNI 
PFLAVLLLLL LALIFFALML HYFKPSKDER KFSMGVEGEK LFRKYLDKLR GYKFYSLPLP
HGGDIDALLI SNKGIFAFEV KNYSGIVECE GDEWKRIKIG KGGGKYEGHV GKPSEEAKRH
ALDLQNYLNT KGFDVIVYPV VVITHSESIL RCERCSVRVI KPQELRILLN KKNELTDKEC
KNIYKEISKL I