Gene Aboo_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1122 
Symbol 
ID8828082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1075047 
End bp1075892 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content38% 
IMG OID 
Productphosphoesterase RecJ domain protein 
Protein accessionYP_003483493 
Protein GI289596797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00100045 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAGA ATGCAGATAT TGATGCGTTT TCCTCCGCTT ATTATTTATC TGAGATACTA 
GGTGATGCAG TTATAGTCTC CGATGGTTTA GATAGATATG TTAAAAATCT TGTGAGGGAG
AAAAATTTGG AAGTTAGAGA TAATATAGAT TTTGATTATG ATGAAGTTAT CACCGTGGAT
ACTGCTAGCA GAGAGCAACT AGGGAAGTTC TCTAACTTAA AAATTGATGT GGTATACGAT
CATCACGAGA GCAACAATAT TGAAGCAGAT AAAAGGTATG TTGATCCTTC TTACCCCTCT
TGTGCAGAAA TGGTTTACGA TATTCACAAA AAGAAGCCAT CTAGATTTGC AGCCCTATTG
CTCCTTGCTG GTATGATAAG TGATACACTA TGGTTCAAGC ATGCCAATAG AAGAACCTTG
CAAATATTCT ACGAAATTAT GAATGCCTAT GATATAGAAT TTCAAGAAAT TCGCACCATC
GTGGATATGC CCATTACATT CAGTGAAAAA ATATCGGTGC TAAAGGGATT TCAGAGAGCT
ATATACAGAA GTTACGGGAA CAAGATTGTG GTGGCCACGA GAGTAAGTGC AAATGAGAGT
ATTGTTGCCA CAGAGCTCAT ATCCTTCGCA GACATTGTTT TTGTGGGCTC TGCAAGGAAA
GATGAGGTTA GGGTTATAGG AAGAAGCAGG GAGGCAAATC TCCTCGATAT TTTTAAAGAA
TTGTCAGAAG ATTTTTCCTG CAAATATGGA GGACATAAAA AAGCTGCAGG TATGAGTTGT
ATAGGTGATT TGGAGGCAAT TCTCAATGCA GCCTTAATTG TGTCCTCTAA ATATCTTGAA
AGGTAA
 
Protein sequence
MHKNADIDAF SSAYYLSEIL GDAVIVSDGL DRYVKNLVRE KNLEVRDNID FDYDEVITVD 
TASREQLGKF SNLKIDVVYD HHESNNIEAD KRYVDPSYPS CAEMVYDIHK KKPSRFAALL
LLAGMISDTL WFKHANRRTL QIFYEIMNAY DIEFQEIRTI VDMPITFSEK ISVLKGFQRA
IYRSYGNKIV VATRVSANES IVATELISFA DIVFVGSARK DEVRVIGRSR EANLLDIFKE
LSEDFSCKYG GHKKAAGMSC IGDLEAILNA ALIVSSKYLE R