| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1122 |
|---|
| Symbol | |
|---|
| ID | 8828082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1075047 |
|---|
| End bp | 1075892 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | phosphoesterase RecJ domain protein |
|---|
| Protein accession | YP_003483493 |
|---|
| Protein GI | 289596797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00100045 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAGA ATGCAGATAT TGATGCGTTT TCCTCCGCTT ATTATTTATC TGAGATACTA
GGTGATGCAG TTATAGTCTC CGATGGTTTA GATAGATATG TTAAAAATCT TGTGAGGGAG
AAAAATTTGG AAGTTAGAGA TAATATAGAT TTTGATTATG ATGAAGTTAT CACCGTGGAT
ACTGCTAGCA GAGAGCAACT AGGGAAGTTC TCTAACTTAA AAATTGATGT GGTATACGAT
CATCACGAGA GCAACAATAT TGAAGCAGAT AAAAGGTATG TTGATCCTTC TTACCCCTCT
TGTGCAGAAA TGGTTTACGA TATTCACAAA AAGAAGCCAT CTAGATTTGC AGCCCTATTG
CTCCTTGCTG GTATGATAAG TGATACACTA TGGTTCAAGC ATGCCAATAG AAGAACCTTG
CAAATATTCT ACGAAATTAT GAATGCCTAT GATATAGAAT TTCAAGAAAT TCGCACCATC
GTGGATATGC CCATTACATT CAGTGAAAAA ATATCGGTGC TAAAGGGATT TCAGAGAGCT
ATATACAGAA GTTACGGGAA CAAGATTGTG GTGGCCACGA GAGTAAGTGC AAATGAGAGT
ATTGTTGCCA CAGAGCTCAT ATCCTTCGCA GACATTGTTT TTGTGGGCTC TGCAAGGAAA
GATGAGGTTA GGGTTATAGG AAGAAGCAGG GAGGCAAATC TCCTCGATAT TTTTAAAGAA
TTGTCAGAAG ATTTTTCCTG CAAATATGGA GGACATAAAA AAGCTGCAGG TATGAGTTGT
ATAGGTGATT TGGAGGCAAT TCTCAATGCA GCCTTAATTG TGTCCTCTAA ATATCTTGAA
AGGTAA
|
|---|
| Protein sequence | MHKNADIDAF SSAYYLSEIL GDAVIVSDGL DRYVKNLVRE KNLEVRDNID FDYDEVITVD
TASREQLGKF SNLKIDVVYD HHESNNIEAD KRYVDPSYPS CAEMVYDIHK KKPSRFAALL
LLAGMISDTL WFKHANRRTL QIFYEIMNAY DIEFQEIRTI VDMPITFSEK ISVLKGFQRA
IYRSYGNKIV VATRVSANES IVATELISFA DIVFVGSARK DEVRVIGRSR EANLLDIFKE
LSEDFSCKYG GHKKAAGMSC IGDLEAILNA ALIVSSKYLE R
|
|---|
| |