| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1120 |
|---|
| Symbol | |
|---|
| ID | 8828080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1073638 |
|---|
| End bp | 1074102 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | aspartate carbamoyltransferase, regulatory subunit |
|---|
| Protein accession | YP_003483491 |
|---|
| Protein GI | 289596795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.00691947 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGC AAACACTTAA AGTTCAAAAA ATAAGGAATG GAATAGTCAT AGACCATATT
CCGTGTGGCA TGGCCCTGAA AGTTTTAAAG ATTTTAAATA TAAACGGAGA TATTGGCTCT
ACAGTGAGCT TGGTGATGCA TGTGAAGAGT AGAATGGGAT GCAAGGATGT TGTTAAAATA
GAAGATAGAT TTTTAGATGA AAGGGAAATT GATAAAATTG CGTTAATTGC ACCAACTGCA
ACTGTTAATG TTATCGAGAA TTATAAAGTG GTCAATAAGC ATAAGGTTGA ATTGCCAGAT
GAGATAGTTG GAATTGTTAA ATGTATGAAC CCAAGATGCA TAACAAATCA AAGAGAGCCT
GTTGTATCAG AGTTCAAAGT TATATCAAAG AATCCCGTTA TACTTAAATG CAAGTACTGT
GAGAGAGAGA TGGGCGTTGA AGACATCATC GAAAACATAC TTTAA
|
|---|
| Protein sequence | MEEQTLKVQK IRNGIVIDHI PCGMALKVLK ILNINGDIGS TVSLVMHVKS RMGCKDVVKI
EDRFLDEREI DKIALIAPTA TVNVIENYKV VNKHKVELPD EIVGIVKCMN PRCITNQREP
VVSEFKVISK NPVILKCKYC EREMGVEDII ENIL
|
|---|
| |