Gene Aboo_0965 details

Gene Information

• Locus tag: Aboo_0965
• ID: 8827919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 927354
• End bp: 927980
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 35%
• Product: hypothetical protein
• Protein accession: YP_003483336
• Protein GI: 289596640

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 0.761266
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTAG ATGATGATAA AGAAGCTTTT CGTAATTTTT CCAAAGCATT TCTTATAAAT 
TTTATTTTTG GGCTCATTAA TGTGATTTTC ATAGTGATTA TGGTGGCTTG GGCTATATCT 
GCCACAGTGA TGCCCATGGG GGGTGGTGAA GTAGAGCCCA CAGGGCCAAT ATACGCATTT 
TTCATCCCTT CAGTGATTTT ATCTTTGATA GGAAACATAA TTTTCGTCTA TTATCTTTGG 
CATGGATTCA AAATTATGGA AACTGTTATG CCAAATGTAT CTATTGGAAA AATAGGAGCA 
TTACTTCTCT TATTTAGCTC CTTCTCCTTA CCCATTATAT TTCCAATTTT TTGGGGTGCG 
CCATCACCTA ATTTTCAATC ACCAGTTGCT TATTTTGGAT TATTTTCAAT ATTTGGTGTT 
GTTGGATTGA TTGGGATTAT ACTACTCGTT ATTGCTATTT ATCGCATAGG TGAAAAGTAC 
GATAATACAA CTATAAAAGT TGGAGCGATA ATATATATTT TCTTATCATT CATAGCAGCC 
ATAGTTCTTT ATTTTGGATT CAAAGAACTT GAGAATAGGA AATCAGGGAA GAATTCAGTA 
ATTCTGCCTC CCCAGCCCCC ATGGTGA 

 

Protein sequence

MSLDDDKEAF RNFSKAFLIN FIFGLINVIF IVIMVAWAIS ATVMPMGGGE VEPTGPIYAF 
FIPSVILSLI GNIIFVYYLW HGFKIMETVM PNVSIGKIGA LLLLFSSFSL PIIFPIFWGA 
PSPNFQSPVA YFGLFSIFGV VGLIGIILLV IAIYRIGEKY DNTTIKVGAI IYIFLSFIAA 
IVLYFGFKEL ENRKSGKNSV ILPPQPPW