Gene Aboo_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0948 
Symbol 
ID8827902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp911403 
End bp912233 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content38% 
IMG OID 
Producttransposase IS4 family protein 
Protein accessionYP_003483319 
Protein GI289596623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.10326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGGA AATTAGACCT GTACAAGGTT GTGAAAATGG GGATGAAAGC TCTAAAGAGA 
GCAAATATTC CTCTTTACTG GAGCAAGTAC TCTAGGAAAG ATTACACTCT GCACCAGCAC
ATGATGCTGA TAGTGCTGAC ACAGTATGTG GGAAGTATAG AAAGAATGCT CCAGATTGTG
CGAGAAATGA GAAAGATAAA GAGGGTAATG AGATTGAAGA AAATCCCCCA TAAAAGCACA
ATTTCAAGAG AGTTGAGAAG AATACCAGAA CGATGGATTC GCATTGTGCT TAGAGAAATA
GTGAAAATAA TGGGAATACC CAATAAATTT GCAGTGGATT CCACAGGTAT TCAAATTTAT
TACCGTTCAT ACTACTACAC ACAGCGAATC GGAGAAGCAG GAAAAATAAG AGAAGGATTG
AAATTGCATG CTGCTGTGGA TATTGAGAGG AAGCTCATTA CCAATGCAAT AGTTACTAAA
TGGCATGCCA ATGATTCACC GTACCTCATA CCTCTTTTGG AGAAAGAGAG TGTAAAAGAA
GTGTATGCAG ATAAAGGCTA TGATTCTCTA CGTAACATAC GATTTGTTCT GAATAAAGGA
GGAACTCCAT ACATAGCAAT CCGTAATAAA GCAAGAAGAG GATTGCGAAG GAGATTGTTA
GAAAAGAGCA AATCACCTGA CTGGAAAAAG AAGTACTCGC ATAGAAATGT AATTGAATCA
GTCTTCCACT CTTTCAAAAG AGTTGTTGGA GATTACATAT TTTCCCATTC TTTCTCTGGT
GCTTCTAAAC TCCTGCTCTT CAAAGTTCTT GCCTATGATC TCTATGTCTA A
 
Protein sequence
MSRKLDLYKV VKMGMKALKR ANIPLYWSKY SRKDYTLHQH MMLIVLTQYV GSIERMLQIV 
REMRKIKRVM RLKKIPHKST ISRELRRIPE RWIRIVLREI VKIMGIPNKF AVDSTGIQIY
YRSYYYTQRI GEAGKIREGL KLHAAVDIER KLITNAIVTK WHANDSPYLI PLLEKESVKE
VYADKGYDSL RNIRFVLNKG GTPYIAIRNK ARRGLRRRLL EKSKSPDWKK KYSHRNVIES
VFHSFKRVVG DYIFSHSFSG ASKLLLFKVL AYDLYV