| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0874 |
|---|
| Symbol | |
|---|
| ID | 8827824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 836474 |
|---|
| End bp | 836971 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | Rubrerythrin |
|---|
| Protein accession | YP_003483245 |
|---|
| Protein GI | 289596549 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000000319278 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTG AAGAAATAAA TTTTGAAACA TTATTCGGAA TAGCCGTTAA GAGTGAGATA
GAGAGCAGGA ATGTTTATGA ATATATGGCA GAAAAAACTA AGAATTACTT ACTAAAAGAT
CGTCTGAAAT TTCTTGCCAA CGAAGAGAAA AAGCATGAGG AATTCCTAAG GAATTACTTT
TCAAAAATGT TTCCTAATAA AGAATTAAAA TTACCTGAAG AATCACCAGT GCCTTTACCA
CATATTGAAT ATGACGCTGA CACACCCATT TCTTCTATTT TAGAGCAGTC GATGAAGGCC
GAAGTTGCGG CCAGAGACTA CTACCTTTCC ATGTCTAAGA AGGCGGAGAA GATGGGTGAT
ATAGAGCTTG CCAAAGGCCT GTACTATCTT GCAAACATGG AGATGGGCCA CTATCATATC
TTGGAAAATG AGCTTGAATC CGAGAAGAGG TTTGAGGACT ACGATGCTTA TTGGCCTATG
ATGCATGTAG GTCCATGA
|
|---|
| Protein sequence | MDIEEINFET LFGIAVKSEI ESRNVYEYMA EKTKNYLLKD RLKFLANEEK KHEEFLRNYF
SKMFPNKELK LPEESPVPLP HIEYDADTPI SSILEQSMKA EVAARDYYLS MSKKAEKMGD
IELAKGLYYL ANMEMGHYHI LENELESEKR FEDYDAYWPM MHVGP
|
|---|
| |