| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0728 |
|---|
| Symbol | |
|---|
| ID | 8827674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 691304 |
|---|
| End bp | 692701 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_003483101 |
|---|
| Protein GI | 289596405 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.102661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTC CGAAGGAGAA CTTCAGTGAG TGGTACAACG AGGTTATCGA GACAGCAGGA
CTTGTTGATA AAAGATATCC TGTTAAGGGA ATGCATGTAT GGCTCCCATA TGGATGGCAG
TTGATGCGCA ATATAGATGA ATATTTTCGC AAAGTTTTTA CGGAGCATAA GCACCAGGAA
GTTTATTTTC CATTGTTGAT TCCCGAAACT GAGTTTAAGA AGGAGGCAGA GCATATAGAA
GGATTTGAGA ATGAAGTTTA TTGGGTTACC CATGGTGGTT TGGATCCATT GGATGTGAAG
TTGGTAGTTA GACCAACAAG CGAGACAGCC ATGTACCCCA TGTTCTCCTT ATGGATTCGT
TCTCATGCAG ATTTACCTCT TCGTATATTC CAAATAGTGA ATGTGTTTAG GTATGAGACA
AAACAGACCC GCACATTTAT AAGGGTTCGA GAGGTACATT TCTTTGAATC TCATACAGCA
CATGCAACTG CTGAAGAATC CGAAGAGCAG ATAAAAGATA ACATAGAGAT ATGGAAAAAG
GTTGCGGATA AGCTTGCGCT ACCCTATGTT TTAGTTCGTA AAACTGATTG GGACAAGTTT
CCGGGAGCGG CATATTCTAT TGGGGCTGAG ACGATTATGC CCTCTGGCCG AACTTTGCAG
ATTGCCACAA TTCACCAGTA TTTTCAGAAT TTCTCAAAAC CTTATGGAAT AGAGTATCTA
AAAGAGGATG GTACCCATGA TTATGTGCAT CAGACCACAT TCGGTATGAG TGAGAGGTTG
GTTGGGGCAA TTGTAGGCAT CCATGGGGAT AATAGGGGCT TAATTCTTCC TCCAGAAATT
GCACCGATTC AGGTTGTCAT AGTTCCAATA GTGAATAAGA ATAAAGAAGG TATACTCCAA
GAAGCAAGAA AAATTGAGAA TGAATTAAAA GAACTCTATA GGGTGCACCT TGATGATAGG
GATAATTACA CTCCCGGCTA CAAGTTCTAC GATTGGGAGC TTAAAGGTGT ACCCCTACGC
CTTGAAATTG GACCTAGGGA TTTGGAAAAA GGACAGGTTG TTCTCGTGCG CAGGGATAAT
TTTGAAAAAA TGTTTGTCTC TCGCAAGGAG TATGTGGATA GAATAGGAGA GCTGCTAAAG
GATATCCAGA AAAGCATGCT GGATAAGGCC AAAAATGAAA TGGAAGAGAA GATAAAAGAT
GTTCACAGTA TAGAGGAGAT TAAAGAGCAT AATGGAATTG CAGCCGTACC CTGGTGTGGA
AGTGAAGAAT GTGGACACAA GCTCGAAGAG CTTACTGAAA AGAAGATTAT AGGAGTTCCA
TTTGAGAAGA AAAAGGGCAG GTGTATAATC TGTGGGAAAG AGACGGATAA AATTGCCTTC
GTGGCAAAAC CCTATTAA
|
|---|
| Protein sequence | MEFPKENFSE WYNEVIETAG LVDKRYPVKG MHVWLPYGWQ LMRNIDEYFR KVFTEHKHQE
VYFPLLIPET EFKKEAEHIE GFENEVYWVT HGGLDPLDVK LVVRPTSETA MYPMFSLWIR
SHADLPLRIF QIVNVFRYET KQTRTFIRVR EVHFFESHTA HATAEESEEQ IKDNIEIWKK
VADKLALPYV LVRKTDWDKF PGAAYSIGAE TIMPSGRTLQ IATIHQYFQN FSKPYGIEYL
KEDGTHDYVH QTTFGMSERL VGAIVGIHGD NRGLILPPEI APIQVVIVPI VNKNKEGILQ
EARKIENELK ELYRVHLDDR DNYTPGYKFY DWELKGVPLR LEIGPRDLEK GQVVLVRRDN
FEKMFVSRKE YVDRIGELLK DIQKSMLDKA KNEMEEKIKD VHSIEEIKEH NGIAAVPWCG
SEECGHKLEE LTEKKIIGVP FEKKKGRCII CGKETDKIAF VAKPY
|
|---|
| |