Gene Aboo_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0543 
Symbol 
ID8827488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp526037 
End bp527440 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content39% 
IMG OID 
Productcation transporter 
Protein accessionYP_003482916 
Protein GI289596220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGA TACTCTATTT CTCACTGAAA CTTCTTACAT ACATATCCAT CTTTATGCTC 
ATTGATGCAG TTTATGCTCT TATTGTGGAT AGAAGTGTGG TCATAACCTT AGCATTTCTA
TTTCCTGCAA GTTGGATTCT CTTTCTCTGG GTTCCTTTTA TGAAAGAGCC AGTGCCTCAA
AATCTCTCGC TCAGGGAATC TTTCAAGGTT GCTGCAATCG GATGGCTTTT GATGTCCTTC
TTTGGAGCCA TACCTTTCAT TCTTTCTGGT TATTTGAATC CTCTTGATGC TTGGTTTGAG
AGCATGTCAG GTTTCACAGC CACAGGATTA ACGATGTTCA CAGATGTAGA GAGCCTGCCA
AAGAGCATAC TTCTCTGGCG CTCACTTACA GAATGGATTG GTGGTGTGGG TGTCATAGCT
CTATTCTTGT CAGTCATGTA CCGCACAAGC AGAGTTGTGC AAAGTTTGTA CTTTGCAGAG
GGCAGAAGCG ATAAAACGGA GCCAACAATA GTTGGAACTG TGAGAAAGAT ATGGGGAATA
TACCTTTTTT ACACCCTCCT TTTTGCACTA ATATTTTATC TTTTAAAGGT GCCGTTATTT
GATGCCATAA ACATATCAAT GACTGCCCTA GCTACTGGTG GTTTTGCTGT AACTAATAAC
AGTATAGCTG CATATTCCCC GTATGTGGCA ATAGCTATGA TTTTTGCGAT GGCTATTGGT
GGAATATCTT TTGTCTCGCA CATAAATCTG TTTAAAGGCA GGGTTAGAGA ATTTTTCTCC
ATAGAACTCA AGGCCATGGT GATAATAATC GTTTTATTTT CCACTATAAT GCTCTTACAT
CTTGCTTGGC TTGGAGAGAG CTGGAATGAG GCTGCATTGC AAACATTCTT TCATGTCACA
TCTGCCCTTA CAGGTACTGG ATTCAGCATA TCTGACCTTG CAAATTTGAC CTCTTTTGAT
AAGACCTTTC TGATTTTGAG TATGATCTTT GGAGGTGCAT ACGGTTCAAC ATCATCTGCC
TTGAAACTCA TAAGAGTTGT TGTGTTGGTT TACGGAATAG TGTGGTATGT AAAGGTTCGG
CTCTATCCTA AAAGTGCAAT AATACCCTTC AAAATAGGAA AGAAGGTTTT TGAATCTACC
GAGGTCAGAG ATGTGTCTAT TTACACCACG ACTTATTTGT TTATGCTTTT GTTGGGTGCG
ATGATATTTA TGGCTTATGG GAACAGCCTT GTTAATTCTT TGTTTGAAGT TGCAAGTGCT
GAAGGTAATG TTGGTCTAAC TGTGGGCATT ACCTCTCCAT TTATGCCTTG GGTTGAGAAA
CTTACACTCA TTTTAGAAAT GTGGTTTGGT AGGTTAGAAA TATTTCCAAT TCTAATCCTT
CTTGCAGATA TAGTAAAGAA ATGA
 
Protein sequence
MNKILYFSLK LLTYISIFML IDAVYALIVD RSVVITLAFL FPASWILFLW VPFMKEPVPQ 
NLSLRESFKV AAIGWLLMSF FGAIPFILSG YLNPLDAWFE SMSGFTATGL TMFTDVESLP
KSILLWRSLT EWIGGVGVIA LFLSVMYRTS RVVQSLYFAE GRSDKTEPTI VGTVRKIWGI
YLFYTLLFAL IFYLLKVPLF DAINISMTAL ATGGFAVTNN SIAAYSPYVA IAMIFAMAIG
GISFVSHINL FKGRVREFFS IELKAMVIII VLFSTIMLLH LAWLGESWNE AALQTFFHVT
SALTGTGFSI SDLANLTSFD KTFLILSMIF GGAYGSTSSA LKLIRVVVLV YGIVWYVKVR
LYPKSAIIPF KIGKKVFEST EVRDVSIYTT TYLFMLLLGA MIFMAYGNSL VNSLFEVASA
EGNVGLTVGI TSPFMPWVEK LTLILEMWFG RLEIFPILIL LADIVKK