Gene Aboo_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0539 
Symbol 
ID8827484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp523730 
End bp524149 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content45% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003482912 
Protein GI289596216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000572124 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTTGA GCGTTTTGAT AAGCGCGAAG GAAAGGGCGG TGCTGGATTA TGCCCTGCTC 
ACAGTTGCCA GTTTAACCTT ATTTTTCGTA TCAATCTTTT ATGTAGCCCT TGCCGTTGGA
GTGATAACAA TACAAAACAC GCTGTCAAAG TGGTTTGGAT GGGGCGGGGT TGTTGCAGGC
TCTCTGTGCA TACTCATACC TGCTCTCGGG CTGATTTTAG GCATTCTTGG CACATTTGCG
GGAATAATTG GCATGCTCAG GGCTTATTCC TCTCTAAGAA AATTGAAAGC CATAGATATG
AGAGAGATTG AGAAGGAAGA GATCAAGTAT GCCCTGCGCA AAGAGTACCT CATAGGCAAG
ATGACCAAGG AAGAATACGA GGAAAAGCTG AAACTAGTGG AGGAGAGATA CAAAGGGTAA
 
Protein sequence
MSLSVLISAK ERAVLDYALL TVASLTLFFV SIFYVALAVG VITIQNTLSK WFGWGGVVAG 
SLCILIPALG LILGILGTFA GIIGMLRAYS SLRKLKAIDM REIEKEEIKY ALRKEYLIGK
MTKEEYEEKL KLVEERYKG