Gene Aboo_0521 details

Gene Information

• Locus tag: Aboo_0521
• ID: 8827466
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 504790
• End bp: 505518
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 40%
• Product: proliferating cell nuclear antigen PcnA
• Protein accession: YP_003482894
• Protein GI: 289596198

Plasmid Coverage information

• Num covering plasmid clones: 63
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACTGA AGATGGACAT AAAGGATTTA AAAGAAATTA CGAATCTTCT CTTAACCCTG 
GTTTCAGAGG CGAAATTTGA GGTTAATGGC GATGGACTTG GAGTAAAGGC AGTGGACCCT 
GCGCATGTGG CAATGATAGT TATAAATGTT GACAGAGATG CTTTTCTTGA ATTTGAGACT 
GAGGAGGAAG AACTCGGGGT TGATTTGGAC AAAGTAAGAG ATATACTTAA ACTAGCTTCC 
TCTGGAGATA TCGTGGAAAT TTCAAAGGAT GGAAATAAAT TGACTTTTCT AATAGGAAAT 
CTAACGAGAA GTATGCCCTT AATTGATACC AGTGCTCTTA GCGTGCCAAA GGTACCCAAC 
TTAGTACTTC CAGCAAAGGT TGTTATACCT ATCAAAGAAT TTGAGCATGG GATTAAAGCG 
GCAGAGAGTA TATCTGATAA TATTACTCTC AGAATCACGC CTACAGAATT TGAAATGTAC 
ACACAAGGAG ATGAGGATGA GGCTCGTCTA AATATACCCC GTGACATGCT TAAAGAACTA 
TCATGCGAGG AGCCAGTAAA GAGCATGTAT CCAGTGGATT ACCTAGTAAA ACTCGTGAAG 
GCAATGGATT CCGCAGATTA TATAACGATA TATATGGGCA CTGATTATCC CATTAAGCTC 
GAATTTGAAA TAACCGGCGG AAAGGGTAAA GCAGAATATC TCTTAGCTCC AAGAATTGAG 
GGAGAATAA 

 

Protein sequence

MRLKMDIKDL KEITNLLLTL VSEAKFEVNG DGLGVKAVDP AHVAMIVINV DRDAFLEFET 
EEEELGVDLD KVRDILKLAS SGDIVEISKD GNKLTFLIGN LTRSMPLIDT SALSVPKVPN 
LVLPAKVVIP IKEFEHGIKA AESISDNITL RITPTEFEMY TQGDEDEARL NIPRDMLKEL 
SCEEPVKSMY PVDYLVKLVK AMDSADYITI YMGTDYPIKL EFEITGGKGK AEYLLAPRIE 
GE