| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0486 |
|---|
| Symbol | |
|---|
| ID | 8827431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 474939 |
|---|
| End bp | 475877 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | GMP synthase, large subunit |
|---|
| Protein accession | YP_003482859 |
|---|
| Protein GI | 289596163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAG TTGAAAAATT CGTGGAAGAG AAGATTGAAG AATTGAAAAA TGAGATTAGG
GGCAAGGCGA TAATTGCATG CTCTGGCGGC GTGGATAGTA CAGTTGCAGC TGTCTTGGTG
CACAAAGCAA TAGGAGATAA GCTCCTCGCC ATCTTCGTTG ACACTGGTTT TATGAGAAAA
AACGAGGCAA AGGAGATCGA TGGGCTGTTC TCCCGTATGG GACTAAATTA CAAGATTGTG
GACGCTTCCA GAGAATTCAT AGAAGCATTG AAGGGTGTGG AAGATCCAGA GAAGAAGAGA
AAAATAATCG GGGCGAAATT CATTGAGGTT TTTGAGAGAG AGGCAGAAGA GTTCGGCGCA
GAATACTTAG TTCAAGGTAC AATAGCCCCC GACTGGATTG AGAGCGGAGG AGGATTGAGA
GACACGATAA AATCCCACCA CAATGTTGGT GGTTTACCTG AAAAGATGAA TTTGAAGCTC
GTGGAGCCAC TTCGTGAGCT TTACAAGGAT GAGGTAAGAG AAATTGCTAG GTTCTTTAAC
CTCGAAATTA AGGAAAGACA ACCTTTCCCT GGGCCAGGAT TGGCCATTAG AATTATTGGC
CCCATAGATG AGGAAAAAAT AGAGATTGTC AGGGAGGCAA ATGCCATAGT TGAGGATGAG
GTTAAGAATT ACTACGATTT TGATTCTCGC CCTTGGCAGT ATTTTGCAGT TCTCCTTCCA
ATACGCTCTG TGGGCGTGCA TGGGGATAAG AGGGCTTATG GATACACAAT AGCCGTTAGG
ATGGTCGATA GTTTAGATGG GATGAGTGCA GCCTATTTCA AAGCACCCCA CGAGCTCCTA
GATAGAATAG CCATAAGATT AACCACAGAG CTCAAAGGAG TGAATAGGGT GGTTTATGAC
ATTACAAACA AGCCACCAGC CACTATTGAG TGGGAATAG
|
|---|
| Protein sequence | MFKVEKFVEE KIEELKNEIR GKAIIACSGG VDSTVAAVLV HKAIGDKLLA IFVDTGFMRK
NEAKEIDGLF SRMGLNYKIV DASREFIEAL KGVEDPEKKR KIIGAKFIEV FEREAEEFGA
EYLVQGTIAP DWIESGGGLR DTIKSHHNVG GLPEKMNLKL VEPLRELYKD EVREIARFFN
LEIKERQPFP GPGLAIRIIG PIDEEKIEIV REANAIVEDE VKNYYDFDSR PWQYFAVLLP
IRSVGVHGDK RAYGYTIAVR MVDSLDGMSA AYFKAPHELL DRIAIRLTTE LKGVNRVVYD
ITNKPPATIE WE
|
|---|
| |