Gene Aboo_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0465 
Symbol 
ID8827410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp454500 
End bp455786 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content44% 
IMG OID 
Productaspartyl-tRNA synthetase 
Protein accessionYP_003482838 
Protein GI289596142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCGAA CACACACCAC CAAAGAGGCA GCCCAGTTAG ACGGGGAGGA AGTTAAAGTA 
TGCGGCTGGA TTCACGATAT AAGAGTTCTG GGAAAGATAG CATTTATAAT TCTCCGAGAT
CGCTATGGTT TTGCGCAGTT AACTCTTATT CGCAGTATTG TTGGAAAAGA GAAGTTTAAA
GAATATACAA AATTGACACG AGAGAGTGTT ATATGCGCTA AGGGTAAAGT ACAGAAAACG
AAGCAGGCAA AACTTGGATT TGAAATATTG CCAGAGGAAA TCGAAGTTTT GAACAGGGCA
GAGAGTCCAT TGCCCCTGGG TGTTGCAGAC AAAGTATCTG CTGATTTGGA AACTCGAATA
GAGAATCGTT TCCTAGATTT GAGAAAGAGG GAAGTTCTAG CAGTTTTTGA AATACGCAGC
ACGATTTTGC AGGGGATAAG AGAATATCTT CTAAACCAGA ACTTTGTGGA GGTACATACT
CCGAAAATCG TGGCTACTGC TACCGAGGGA GGTACGGAGC TTTTCCCTGT GAAGTACTTT
GAGAAAGATG CTTATTTAAA TCAAAGTCCA CAACTTTATA AGCAGGTTTT GATGGCTGCA
GGTTTAGATA GAGTTCTGGA AGTTGCCCCA GCATTTAGAG CTGAGGAGCA CAACACAACG
AGGCATCTAA ATGAATTCAT ATCAATAGAC ATAGAGATGA GCTTTGCGGA TGAGGAAGAT
GCTATGTATA TGCTTGAGGG AAGCATAGTT AACGCCATAA AAAAATTGAA AGAGGAAAGA
AAGGAAGAAA TGGAAATTTT AGGAATGAAT TGGGAGGTAC CATCTCTGCC CTTTAAGAGG
ATAACCTACG ATGAGGCCCT AGAGATCGTT AGGAAGAAGG GTATTGATAT GGAGTGGGGG
GAGGATTTCT CTACAGAGGC ATTGAAGGCC CTAGGCTCTG AACTCCAGGA ATTTTATTTC
ATAACGAGGT GGCCCATGGA GATAAAGCCC TTTTATGTGC TACCTGATGG GAAGTATTCC
CACGCCTTTG ACCTTATGTA CGGGGAGAGG GAGATAACAT CGGGAGCCCA GAGAAATCAT
GTGTATGAAA GCCTAGTTGA GGTCATGCGC TCCAAGGGCT TGAACCCAGA GAATTTTGAG
TATTACCTCC GAGCATTCCG CTACGGCATG CCACCCCACG CTGGCTGGGG TCTCGGGCTT
GAGCGATTGG TTATGATAAT AACCGGAGTG AAGAACATAA GGGAATGCGT GATATTCCCA
AGGGATAGAA CGAGGTTAGT GCCCTAA
 
Protein sequence
MLRTHTTKEA AQLDGEEVKV CGWIHDIRVL GKIAFIILRD RYGFAQLTLI RSIVGKEKFK 
EYTKLTRESV ICAKGKVQKT KQAKLGFEIL PEEIEVLNRA ESPLPLGVAD KVSADLETRI
ENRFLDLRKR EVLAVFEIRS TILQGIREYL LNQNFVEVHT PKIVATATEG GTELFPVKYF
EKDAYLNQSP QLYKQVLMAA GLDRVLEVAP AFRAEEHNTT RHLNEFISID IEMSFADEED
AMYMLEGSIV NAIKKLKEER KEEMEILGMN WEVPSLPFKR ITYDEALEIV RKKGIDMEWG
EDFSTEALKA LGSELQEFYF ITRWPMEIKP FYVLPDGKYS HAFDLMYGER EITSGAQRNH
VYESLVEVMR SKGLNPENFE YYLRAFRYGM PPHAGWGLGL ERLVMIITGV KNIRECVIFP
RDRTRLVP