Gene Aboo_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0459 
Symbol 
ID8827402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp448118 
End bp449278 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content38% 
IMG OID 
ProductAmino acid transporter transmembrane 
Protein accessionYP_003482832 
Protein GI289596136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGCA AACACAAGAT TCAAAGGTAT TTCAAAAGAT TACTCCTAAT AAAAAGAGGT 
TTTATGTTTA AAACCCTCAG AACTTCAACA ATAAAGGTAA CAAAACCAAA AATTAGTGTT
GGCGAGGGGC TCGCAATATT GATAGGCACT CAAATCGGTG CGGGTGTTCT AGGACTTCCC
TACGCTGCTG CTCAAGTAGG TTTAATCCCA GCCATCATAA TTTTATTTGG GATTATGGGA
ATTCTTCTGC TAACCGCCCT CTTAACACTC AAACTCTCCG TAGAAATGGG TGGAGCTCAG
ATGAGCACAA TAGCGTATAG AACTTTGGGA AGTTTGGGTG GATGGATTAT GTATATAAGC
ATAAGTGTTA TGAGCTTTGG AGCTCTTTTA GCTTACATAT CTGGAATGGG CAGTGTTATG
AGTTCTTTAT TTTCAATAAA CACCACTCTG GGTGCATTGA TCTTCTGGAT TTTTGCCTCT
ATAATCATAT ATATGGGCAT AGAGGCGAGT GGTAAAACTG AACTTATAAT GAACTATGTG
ATGATTCTTC TTTTTATAGG GGTAATAATA ATGCTAGTTC CCCATGCTAA TGTAAAAAAT
GCTCTTTATG TTAAATGGGG TGGTATTTTC GCCATAACTG GTGTATCCAT ATTTGCATTG
GGCTGTCATA TGGTAATACC GGATGTGTAT AAGGGAATTG GAGATTACAA CAAAACTAAG
AGAGTGATTG TCTTATCTTT CTTAATACCC ACCATAATTT ATTCCCTGTT TATGGCAGCA
TTCTTGCTTG TATATGGAGC AAAAACTCCA CAAATTGCTA CACAGGCCCT TAGCTCGTTT
TATGGTAAAT TTGGGGAGAT TGTGGGAAAT GTTATCCCTT TTATAGCAAT TATCACCAGT
TATATCGGCG TGGGTTTAGC CCAGCAAAGC AACAGTGTTG AGTATATCAA TATGAAAAAG
TGGCTGGCAT GGAGCTTAAC AGTCGTACCA CCTCTTTTAG TTTACCTGCT TGGAATTTCA
AACTTTACTT ATATTCTGGC ATTTGCAGGA AGTACCGGGG ATCTCACAGC GTTTATAATT
CTACCGCTAG CTATGTGGCT CGTAAAATGG TTGAGAAATT ACAAAAAGAT TAAAATACCT
AGCCCAATTG TAAGGAGGTG A
 
Protein sequence
MLRKHKIQRY FKRLLLIKRG FMFKTLRTST IKVTKPKISV GEGLAILIGT QIGAGVLGLP 
YAAAQVGLIP AIIILFGIMG ILLLTALLTL KLSVEMGGAQ MSTIAYRTLG SLGGWIMYIS
ISVMSFGALL AYISGMGSVM SSLFSINTTL GALIFWIFAS IIIYMGIEAS GKTELIMNYV
MILLFIGVII MLVPHANVKN ALYVKWGGIF AITGVSIFAL GCHMVIPDVY KGIGDYNKTK
RVIVLSFLIP TIIYSLFMAA FLLVYGAKTP QIATQALSSF YGKFGEIVGN VIPFIAIITS
YIGVGLAQQS NSVEYINMKK WLAWSLTVVP PLLVYLLGIS NFTYILAFAG STGDLTAFII
LPLAMWLVKW LRNYKKIKIP SPIVRR