| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0143 |
|---|
| Symbol | |
|---|
| ID | 8827080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 150016 |
|---|
| End bp | 151062 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | flagella protein |
|---|
| Protein accession | YP_003482517 |
|---|
| Protein GI | 289595821 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.626308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGGT TGTTTAAAAA GAAGAAAAAA GAGAAGAAGC CAGCGAAAAA AGCAAAGAAG
ACAAAGAAGG TAGAGGAGCC AGAGATTCCA GAGATACCTG CAGAGGCAGT GCCTGAAATC
TCCGAGGCAG GGATAAACGA TGCTGAAATT GAGAAGGTGC TGGGTACAGC CCTCAAGGGT
TTGGATATAG ATGAGCTTAC AACGAAGCTC GATGACATCT CAAGGAAGAT AGACGAGTTT
CAAGCAAAAA TCGAGCGCCA CGATTCAATG ATTGGCTCTT TGGAAAATGA AATCAGCGAG
ATCAGGAAAG TAAACGAGGA GATGCAGGAT AATATCAAGA GACTCCTTGA TATCTACGAG
GTAGTTTCAC AGAAGATCAA TCCATTCATA GAGATGGGCG AAAGGAGAGA GATGCCCATA
ACTCCAGATA CCGTCATACC ACCGGAAGAG CCAGGGATAA TACCTTCAGT GTTTGAAGAA
AGCACGCAGA TTCCAGAAGA GAAGCCAAGG GAAATGCCTA AGGAAAAGCA AAGGGAGTAT
GTACAAGAGA ATCCAGCCCC AGTGGAAGAG AGAAGGAAAG AACCAGAGCT ACCGAAACCA
GGTGAGGGTC CGATACTCAA GCATATCAAG AAGGACTATT ACACCATAGT GCTCCTAATG
CGCTGGATCG AGTTCCTGTT TGAAAGAGTG AAAAGGGACA AAATTACATT GCTCTTGGAC
TACTATGTGG ACATTGGCTG GATAAGTAAA GAAGTGAAGT CAGAGATAAT GGCATACGCG
AGAGGTGAGG TTCAAGATGT TACCAAGTAC TTCCCTGAGG AAGAGATAGA AGCTGAGATA
GAAACGCCTG CTGGAACTAT AAGGGCACCA AAGCCCAGAA TATACAAGAA GGTTGAAGAT
TGGAGATTGA GCGCAGAGGA TCATCTAAAA TCATTGCTCT TCATAATGAA GATTGCAGGT
GTGGAGGTGA ACAAGGACCG CCTGAATTCC TTAGAACAGG AAATCGAGAA ATTCAAAAAA
TCCCTGTGGG AGTACCACGG GGTTTAA
|
|---|
| Protein sequence | MAGLFKKKKK EKKPAKKAKK TKKVEEPEIP EIPAEAVPEI SEAGINDAEI EKVLGTALKG
LDIDELTTKL DDISRKIDEF QAKIERHDSM IGSLENEISE IRKVNEEMQD NIKRLLDIYE
VVSQKINPFI EMGERREMPI TPDTVIPPEE PGIIPSVFEE STQIPEEKPR EMPKEKQREY
VQENPAPVEE RRKEPELPKP GEGPILKHIK KDYYTIVLLM RWIEFLFERV KRDKITLLLD
YYVDIGWISK EVKSEIMAYA RGEVQDVTKY FPEEEIEAEI ETPAGTIRAP KPRIYKKVED
WRLSAEDHLK SLLFIMKIAG VEVNKDRLNS LEQEIEKFKK SLWEYHGV
|
|---|
| |